RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 UGT8Q16880 541 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.72□□□□□ -1.81
FOXN3-216ENST00000557496 ATP13A4Q4VNC1 1196 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 ZNF362Q5T0B9 420 aaPredicted RBP3.72□□□□□ -1.81
FOXN3-216ENST00000557496 Q6ZVL8 140 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 GPR149Q86SP6 731 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 MAPKAPK5Q8IW41 473 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 TMEM132CQ8N3T6 1108 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 LRFN3Q9BTN0 628 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 RSAD1Q9HA92 442 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 TOPORSQ9NS56 1045 aaPredicted RBP3.72□□□□□ -1.81
FOXN3-216ENST00000557496 EDARQ9UNE0 448 aa3.72□□□□□ -1.81
FOXN3-216ENST00000557496 SALL3Q9BXA9 1300 aa3.71□□□□□ -1.81
FOXN3-216ENST00000557496 A0A087X0B3 334 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 MGST3O14880 152 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 C1RP00736 705 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 ENPP1P22413 925 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 PTPN7P35236 360 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 SP140Q13342 867 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 KIAA0907Q7Z7F0 614 aaPredicted RBP3.71□□□□□ -1.82
FOXN3-216ENST00000557496 DRC7Q8IY82 874 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 CLRN3Q8NCR9 226 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 OR7D4Q8NG98 312 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 CAGE1Q8TC20 777 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 TSPEARQ8WU66 669 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 FUBP3Q96I24 572 aaKnown RBP eCLIP3.71□□□□□ -1.82
FOXN3-216ENST00000557496 PHACTR3Q96KR7 559 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 DRC1Q96MC2 740 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 Q96MF0 132 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 ACAP3Q96P50 834 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 WDR26Q9H7D7 661 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 BCO1Q9HAY6 547 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 DPP7Q9UHL4 492 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 TLK1Q9UKI8 766 aa3.71□□□□□ -1.82
FOXN3-216ENST00000557496 COL11A2P13942 1736 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 A0A1B0GTW7 788 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 AKR1B10O60218 316 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 PDE8AO60658 829 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 ADSLP30566 484 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 SESN3P58005 492 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 RAP2BP61225 183 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 SIM1P81133 766 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 DHCR24Q15392 516 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 SPDYE7PQ495Y7 208 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 RRP12Q5JTH9 1297 aaKnown RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 GJC2Q5T442 439 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 TSHZ3Q63HK5 1081 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 Q6ZNX1 250 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 MED25Q71SY5 747 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 JAZF1Q86VZ6 243 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 GPR156Q8NFN8 814 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 LEO1Q8WVC0 666 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 RIN2Q8WYP3 895 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 HOXB13Q92826 284 aaPredicted RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 NAF1Q96HR8 494 aaKnown RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 RAX2Q96IS3 184 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 ZSWIM1Q9BR11 485 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 SPATA5L1Q9BVQ7 753 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 ALOXE3Q9BYJ1 711 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 RNPEPQ9H4A4 650 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 TMEM74BQ9NUR3 256 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 FAM30AQ9NZY2 134 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 TESQ9UGI8 421 aaKnown RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 SCOCQ9UIL1 159 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 MAPRE3Q9UPY8 281 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 FRMD4BQ9Y2L6 1034 aa3.7□□□□□ -1.82
FOXN3-216ENST00000557496 MRPL42Q9Y6G3 142 aaKnown RBP3.7□□□□□ -1.82
FOXN3-216ENST00000557496 CCDC78A2IDD5 438 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 NEMP1O14524 444 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 ULK1O75385 1050 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 C1QL1O75973 258 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 IGLV2-14P01704 120 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 CDK4P11802 303 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 GCSHP23434 173 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 ECHS1P30084 290 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 GUCY1A2P33402 732 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 SREBF1P36956 1147 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 CXADRP78310 365 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 MRPS9P82933 396 aaKnown RBP3.69□□□□□ -1.82
FOXN3-216ENST00000557496 CDK17Q00537 523 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 NHLH1Q02575 133 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 ZNF169Q14929 603 aaPredicted RBP3.69□□□□□ -1.82
FOXN3-216ENST00000557496 ADRM1Q16186 407 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 AFMIDQ63HM1 303 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 HDGFL2Q7Z4V5 671 aaPredicted RBP3.69□□□□□ -1.82
FOXN3-216ENST00000557496 GLCCI1Q86VQ1 547 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 FBXO18Q8NFZ0 1043 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 AUTS2Q8WXX7 1259 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 USP7Q93009 1102 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 MRI1Q9BV20 369 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 DUSP26Q9BV47 211 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 REXO4Q9GZR2 422 aaKnown RBP3.69□□□□□ -1.82
FOXN3-216ENST00000557496 KCNE5Q9UJ90 142 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 SIK3Q9Y2K2 1263 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 NOX1Q9Y5S8 564 aa3.69□□□□□ -1.82
FOXN3-216ENST00000557496 MATN4O95460 622 aa3.68□□□□□ -1.82
FOXN3-216ENST00000557496 FGFR4P22455 802 aa3.68□□□□□ -1.82
FOXN3-216ENST00000557496 ALDH1A3P47895 512 aa3.68□□□□□ -1.82
FOXN3-216ENST00000557496 ID4P47928 161 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms