RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PCBP1Q15365 356 aaKnown RBP eCLIP15.58■□□□□ 0.08
SLIRP-210ENST00000557431 NAB2Q15742 525 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 PPM1LQ5SGD2 360 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 CYP26C1Q6V0L0 522 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 CATSPER3Q86XQ3 398 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 DCLK2Q8N568 766 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 MTMR9Q96QG7 549 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 KXD1Q9BQD3 176 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 TTPALQ9BTX7 342 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 NFKBIZQ9BYH8 718 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 GOLGA2P5Q9HBQ8 144 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.08
SLIRP-210ENST00000557431 PAPLNO95428 1278 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 LMNAP02545 664 aaKnown RBP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 PRKCBP05771 671 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 SP9P0CG40 484 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 CD72P21854 359 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 CDCA2Q69YH5 1023 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 RSPO2Q6UXX9 243 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 PJA1Q8NG27 643 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 SLC7A14Q8TBB6 771 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 PIK3R5Q8WYR1 880 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 WASF1Q92558 559 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 GTF3C6Q969F1 213 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 HINFPQ9BQA5 517 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 FZD8Q9H461 694 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 PRMT7Q9NVM4 692 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 SIT1Q9Y3P8 196 aa15.57■□□□□ 0.08
SLIRP-210ENST00000557431 MTF2Q9Y483 593 aaPredicted RBP15.57■□□□□ 0.08
SLIRP-210ENST00000557431 ATG2BQ96BY7 2078 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 N4BP3O15049 544 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 THP07101 528 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 BRCC3P46736 316 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 PRPF4BQ13523 1007 aaKnown RBP15.56■□□□□ 0.08
SLIRP-210ENST00000557431 LIN9Q5TKA1 542 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 POTEHQ6S545 545 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 ZBTB8OSQ8IWT0 167 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 FGF13Q92913 245 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 RMDN1Q96DB5 314 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 CCDC113Q9H0I3 377 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 SLC2A4RGQ9NR83 387 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 CDH7Q9ULB5 785 aa15.56■□□□□ 0.08
SLIRP-210ENST00000557431 ZNF638Q14966 1978 aaKnown RBP15.55■□□□□ 0.08
SLIRP-210ENST00000557431 TCHHQ07283 1943 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 TKTP29401 623 aaKnown RBP15.55■□□□□ 0.08
SLIRP-210ENST00000557431 OR1D2P34982 312 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 ECM1Q16610 540 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 PHLDB3Q6NSJ2 640 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 C1orf210Q8IVY1 113 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 MAML2Q8IZL2 1156 aaPredicted RBP15.55■□□□□ 0.08
SLIRP-210ENST00000557431 CEP120Q8N960 986 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 C3orf58Q8NDZ4 430 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 NXPE3Q969Y0 559 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 DNMT3BQ9UBC3 853 aaKnown RBP15.55■□□□□ 0.08
SLIRP-210ENST00000557431 CEP250Q9BV73 2442 aa15.55■□□□□ 0.08
SLIRP-210ENST00000557431 GPR179Q6PRD1 2367 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 ZMYM2Q9UBW7 1377 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 MED19A0JLT2 244 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-210ENST00000557431 CREMQ03060 361 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 UBXN2BQ14CS0 331 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 ZNF174Q15697 407 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 FAM187BQ17R55 369 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 AXDND1Q5T1B0 1012 aaPredicted RBP15.54■□□□□ 0.08
SLIRP-210ENST00000557431 PADI6Q6TGC4 694 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 CD300LGQ6UXG3 332 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 DDX27Q96GQ7 796 aaKnown RBP15.54■□□□□ 0.08
SLIRP-210ENST00000557431 PRIMPOLQ96LW4 560 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 PLA2G2FQ9BZM2 168 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 TUFT1Q9NNX1 390 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 CDY1Q9Y6F8 540 aa15.54■□□□□ 0.08
SLIRP-210ENST00000557431 ARHGEF35A5YM69 484 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 NRG2O14511 850 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-210ENST00000557431 CLCNKBP51801 687 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 STARD6P59095 220 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 SOX4Q06945 474 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-210ENST00000557431 NBR1Q14596 966 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 MLF2Q15773 248 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-210ENST00000557431 MAPK6Q16659 721 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 SLC5A9Q2M3M2 681 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 NT5DC1Q5TFE4 455 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 NPAS3Q8IXF0 933 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 GPR65Q8IYL9 337 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 MCRS1Q96EZ8 462 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 ADPGKQ9BRR6 497 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 F5P12259 2224 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 DMXL1Q9Y485 3027 aa15.53■□□□□ 0.08
SLIRP-210ENST00000557431 DNAH14Q0VDD8 3507 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 KANSL1LA0AUZ9 987 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 ACKR2O00590 384 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 B3GAT3O94766 335 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 HNRNPA1P09651 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 XRCC6P12956 609 aaKnown RBP eCLIP15.52■□□□□ 0.08
SLIRP-210ENST00000557431 OSTNP61366 133 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 FOXK2Q01167 660 aa15.52■□□□□ 0.08
SLIRP-210ENST00000557431 TRIM29Q14134 588 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms