RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CXCL14O95715 111 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 MYL1P05976 194 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 CLTAP09496 248 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 CTSAP10619 480 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 AFMP43652 599 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 NRIP1P48552 1158 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-209ENST00000557342 COL19A1Q14993 1142 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 POSTNQ15063 836 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 SYCP3Q8IZU3 236 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 EFHBQ8N7U6 833 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 MRPL43Q8N983 215 aaKnown RBP13.63□□□□□ -0.23
SLIRP-209ENST00000557342 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-209ENST00000557342 SNX27Q96L92 541 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 UROC1Q96N76 676 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 PPP1R10Q96QC0 940 aaKnown RBP13.63□□□□□ -0.23
SLIRP-209ENST00000557342 TSPAN18Q96SJ8 248 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 MSTO1Q9BUK6 570 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 TMEM206Q9H813 350 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
SLIRP-209ENST00000557342 A0A0B4J269 797 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 CASTOR2A6NHX0 329 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
SLIRP-209ENST00000557342 TADA2AO75478 443 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 SOD2P04179 222 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 SRGAP2BP0DMP2 458 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 MYBP10242 640 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 KCNE1P15382 129 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 CA8P35219 290 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 NAB2Q15742 525 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 DUSP6Q16828 381 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 CTC1Q2NKJ3 1217 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 TJAP1Q5JTD0 557 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 GLRA4Q5JXX5 417 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
SLIRP-209ENST00000557342 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
SLIRP-209ENST00000557342 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 CCDC34Q96HJ3 373 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 HERC2P3Q9BVR0 1158 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
SLIRP-209ENST00000557342 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 PCDHGC5Q9Y5F6 944 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
SLIRP-209ENST00000557342 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 ANKRD63C9JTQ0 380 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 URODP06132 367 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 KCNA5P22460 613 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 CASP5P51878 434 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 NDUFA8P51970 172 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 POU5F1Q01860 360 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 ADAM15Q13444 863 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 CUL4BQ13620 913 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 PUS10Q3MIT2 529 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 LEXMQ3ZCV2 418 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 FAM26FQ5R3K3 315 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 FUT10Q6P4F1 479 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 SLC39A4Q6P5W5 647 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 CD302Q8IX05 232 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 RNF168Q8IYW5 571 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 POMGNT1Q8WZA1 660 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 VN1R3Q9BXE9 311 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 EMILIN2Q9BXX0 1053 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 BLZF1Q9H2G9 400 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLIRP-209ENST00000557342 UBE4BO95155 1302 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 EYSQ5T1H1 3165 aa13.61□□□□□ -0.23
SLIRP-209ENST00000557342 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 PER2O15055 1255 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 FAM189A1O60320 539 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 EFEMP2O95967 443 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
SLIRP-209ENST00000557342 CXCL8P10145 99 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 GARTP22102 1010 aa13.6□□□□□ -0.23
SLIRP-209ENST00000557342 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms