RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 LMNB2Q03252 620 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 RING1Q06587 406 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 COASYQ13057 564 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 NKG7Q16617 165 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 MSMPQ1L6U9 139 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 NAALADL2Q58DX5 795 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 PRAMEF13Q5VWM6 474 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 CASC1Q6TDU7 716 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 PPTC7Q8NI37 304 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 APBB2Q92870 758 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 MSLNLQ96KJ4 702 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 FSD1Q9BTV5 496 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 RSRP1Q9BUV0 290 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 PHF7Q9BWX1 381 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-247ENST00000557311 IFIH1Q9BYX4 1025 aaKnown RBP5.63□□□□□ -1.51
ATXN3-247ENST00000557311 NAPBQ9H115 298 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
ATXN3-247ENST00000557311 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 C17orf102A2RUQ5 167 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 M0R2C6 588 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 LINC01565O15544 149 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 RANBP6O60518 1105 aaKnown RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 NMT2O60551 498 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 TBX10O75333 385 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 KIF20AO95235 890 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 CBX7O95931 251 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 MMP1P03956 469 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 ICAM3P32942 547 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 NTF4P34130 210 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 NBL1P41271 181 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 ID4P47928 161 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 RRP1P56182 461 aaKnown RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 BNIP3Q12983 259 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 IFI16Q16666 785 aaKnown RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 KCNV1Q6PIU1 500 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 MTERF4Q7Z6M4 381 aaKnown RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 SIRT2Q8IXJ6 389 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 FAM177A1Q8N128 213 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 MFSD2AQ8NA29 543 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 SYTL5Q8TDW5 730 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 ATP6V0A1Q93050 837 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 ASIC4Q96FT7 647 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 RIPOR3Q96MK2 946 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 TMEM47Q9BQJ4 181 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 TCP11L1Q9NUJ3 509 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 KLHL3Q9UH77 587 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-247ENST00000557311 MRVI1Q9Y6F6 885 aa5.62□□□□□ -1.51
ATXN3-247ENST00000557311 PRR23AA6NEV1 266 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 GFRA2O00451 464 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 ENPP3O14638 875 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 CEACAM5P06731 702 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 FGRP09769 529 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 ZNF286BP0CG31 522 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 TGFB3P10600 412 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 GNAT1P11488 350 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 ATF7P17544 494 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 MCM4P33991 863 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 CAMK1Q14012 370 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 BTG3Q14201 252 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 SLBPQ14493 270 aaKnown RBP eCLIP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 PLCL1Q15111 1095 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 CELF3Q5SZQ8 465 aaKnown RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 SFRP5Q5T4F7 317 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 ARHGEF16Q5VV41 709 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 CDKAL1Q5VV42 579 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 LETMD1Q6P1Q0 360 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 RASGRP2Q7LDG7 609 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 FAM13CQ8NE31 585 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 PANK1Q8TE04 598 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 GATAD2BQ8WXI9 593 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 TBC1D5Q92609 795 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 P2RX5Q93086 422 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 NKD2Q969F2 451 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 TMEM87BQ96K49 555 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 HRASLS5Q96KN8 279 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 SPATA33Q96N06 139 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 TTC14Q96N46 770 aa5.61□□□□□ -1.51
ATXN3-247ENST00000557311 IPO9Q96P70 1041 aaKnown RBP5.61□□□□□ -1.51
ATXN3-247ENST00000557311 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms