RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RARRES1P49788 294 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
SNX6-209ENST00000557265 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 CCDC43Q96MW1 224 aaKnown RBP13.62□□□□□ -0.23
SNX6-209ENST00000557265 LTB4R2Q9NPC1 389 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 HCFC1R1Q9NWW0 138 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 DOCK8Q8NF50 2099 aa13.62□□□□□ -0.23
SNX6-209ENST00000557265 SPTBN2O15020 2390 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 LRRIQ4A6NIV6 560 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 USO1O60763 962 aaKnown RBP13.61□□□□□ -0.23
SNX6-209ENST00000557265 CDKL5O76039 1030 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 THP07101 528 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 OR1D2P34982 312 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 SCRN1Q12765 414 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 RAB33AQ14088 237 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 PABPC1LQ4VXU2 614 aaKnown RBP13.61□□□□□ -0.23
SNX6-209ENST00000557265 ZBTB41Q5SVQ8 909 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 PDXDC1Q6P996 788 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 RSPO2Q6UXX9 243 aaPredicted RBP13.61□□□□□ -0.23
SNX6-209ENST00000557265 TPRG1Q6ZUI0 275 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 NPAS3Q8IXF0 933 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 ING5Q8WYH8 240 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 CNTNAP3BQ96NU0 1288 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 CNTNAP3Q9BZ76 1288 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 GPRC5CQ9NQ84 441 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 PRMT7Q9NVM4 692 aaPredicted RBP13.61□□□□□ -0.23
SNX6-209ENST00000557265 ZSCAN32Q9NX65 697 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
SNX6-209ENST00000557265 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
SNX6-209ENST00000557265 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 POU2F2P09086 479 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 SDHBP21912 280 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 TARSP26639 723 aaKnown RBP13.6□□□□□ -0.23
SNX6-209ENST00000557265 MAGEA9P43362 315 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 CACNA1BQ00975 2339 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
SNX6-209ENST00000557265 NR5A1Q13285 461 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 NAB2Q15742 525 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 CALCRLQ16602 461 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 TSSK4Q6SA08 328 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 ZNF852Q6ZMS4 543 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 GPR161Q8N6U8 529 aaKnown RBP13.6□□□□□ -0.23
SNX6-209ENST00000557265 ZBTB44Q8NCP5 570 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
SNX6-209ENST00000557265 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 MCRS1Q96EZ8 462 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 NELL2Q99435 816 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 FZD8Q9H461 694 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
SNX6-209ENST00000557265 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
SNX6-209ENST00000557265 N4BP3O15049 544 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 NCAM2O15394 837 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 RECQL4O94761 1208 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 XRCC6P12956 609 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNX6-209ENST00000557265 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 ATXN1P54253 815 aaKnown RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 FAM187BQ17R55 369 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 CDCA2Q69YH5 1023 aaPredicted RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 NOSTRINQ8IVI9 506 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 ZBTB8OSQ8IWT0 167 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 NELL1Q92832 810 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 PLA2G2FQ9BZM2 168 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 EPC1Q9H2F5 836 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 MTRRQ9UBK8 725 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
SNX6-209ENST00000557265 CDY1Q9Y6F8 540 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 ACACBO00763 2458 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 COL4A3Q01955 1670 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 STK36Q9NRP7 1315 aa13.59□□□□□ -0.23
SNX6-209ENST00000557265 LILRB5O75023 590 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 ECI2O75521 394 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 KRT37O76014 449 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 B3GAT3O94766 335 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 RHOP08100 348 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 LIG1P18858 919 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 FGFR3P22607 806 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 KRT2P35908 639 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 TXKP42681 527 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 RPS9P46781 194 aaKnown RBP13.58□□□□□ -0.24
SNX6-209ENST00000557265 FZD5Q13467 585 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 PRPF4BQ13523 1007 aaKnown RBP13.58□□□□□ -0.24
SNX6-209ENST00000557265 SLC5A9Q2M3M2 681 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 RTL10Q7L3V2 364 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 TNFRSF25Q93038 417 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 HEBP1Q9NRV9 189 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 GDE1Q9NZC3 331 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms