RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 C2orf16Q68DN1 1984 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 E9PMD0 336 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 PRPHP41219 470 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 C8orf34Q49A92 452 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 PDXDC1Q6P996 788 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 MYADMQ96S97 322 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 TMEM134Q9H6X4 195 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 FAM86C1Q9NVL1 165 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 FBXL21Q9UKT6 434 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 TNFSF13BQ9Y275 285 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 CACNA1HO95180 2353 aa17.48■□□□□ 0.39
TUBB3-213ENST00000557262 MTCL1Q9Y4B5 1905 aaKnown RBP17.47■□□□□ 0.39
TUBB3-213ENST00000557262 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 PEX3P56589 373 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 PSMD5Q16401 504 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 IL17AQ16552 155 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 DTHD1Q6ZMT9 781 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 SLC44A3Q8N4M1 653 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 FLCNQ8NFG4 579 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 RSAD2Q8WXG1 361 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
TUBB3-213ENST00000557262 WNT16Q9UBV4 365 aa17.47■□□□□ 0.39
TUBB3-213ENST00000557262 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
TUBB3-213ENST00000557262 USP34Q70CQ2 3546 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 PP2D1A8MPX8 630 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 HNRNPA1P09651 372 aaKnown RBP eCLIP17.46■□□□□ 0.39
TUBB3-213ENST00000557262 LAMP2P13473 410 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 NPR3P17342 541 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 CDC25AP30304 524 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 NPTX2P47972 431 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 RINT1Q6NUQ1 792 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-213ENST00000557262 UROC1Q96N76 676 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
TUBB3-213ENST00000557262 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.39
TUBB3-213ENST00000557262 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
TUBB3-213ENST00000557262 SMIM28A0A1B0GU29 152 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 TMEM189-UBE2V1I3L0A0 370 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 NARSO43776 548 aaKnown RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 HIP1RO75146 1068 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 B3GAT3O94766 335 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 FGFR3P22607 806 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 GRM5P41594 1212 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 YARSP54577 528 aaKnown RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 DMP1Q13316 513 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 RABEP1Q15276 862 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 GLRA4Q5JXX5 417 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 PPM1LQ5SGD2 360 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 C1orf186Q6ZWK4 172 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 DAW1Q8N136 415 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 SIX5Q8N196 739 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 MRPL4Q9BYD3 311 aaKnown RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 C17orf75Q9HAS0 396 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 PTPRHQ9HD43 1115 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 KMT5AQ9NQR1 393 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 ZFP37Q9Y6Q3 630 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-213ENST00000557262 PHLPP2Q6ZVD8 1323 aa17.45■□□□□ 0.38
TUBB3-213ENST00000557262 ADAM12O43184 909 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 TRAPPC3O43617 180 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 PI15O43692 258 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 AOC1P19801 751 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 IGFBP6P24592 240 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 OR1D2P34982 312 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 CLCNKBP51801 687 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 RAB33AQ14088 237 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 UPP1Q16831 310 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 RILPL1Q5EBL4 403 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 XKR4Q5GH76 650 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 LIN9Q5TKA1 542 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 CWF19L1Q69YN2 538 aaKnown RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 ALKAL1Q6UXT8 129 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 NTPCRQ9BSD7 190 aaKnown RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 MMTAG2Q9BU76 263 aaKnown RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 RUSC1Q9BVN2 902 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 TIPINQ9BVW5 301 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 CDT1Q9H211 546 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 TOPORSQ9NS56 1045 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-213ENST00000557262 ARHGAP28Q9P2N2 729 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 KCNG1Q9UIX4 513 aa17.44■□□□□ 0.38
TUBB3-213ENST00000557262 SFI1A8K8P3 1242 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 ANHXE9PGG2 379 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 ST18O60284 1047 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 C8AP07357 584 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 CFHP08603 1231 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 SRFP11831 508 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 FSHRP23945 695 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 HOXA9P31269 272 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 MAPK7Q13164 816 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 ZNF568Q3ZCX4 644 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 CD300LGQ6UXG3 332 aa17.43■□□□□ 0.38
TUBB3-213ENST00000557262 TAS1R3Q7RTX0 852 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms