RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 NAP1L4Q99733 375 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 DHX33Q9H6R0 707 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 IGSF9Q9P2J2 1179 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 DDX25Q9UHL0 483 aaKnown RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 PCDHB2Q9Y5E7 798 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 COL4A3BPQ9Y5P4 624 aa9.68□□□□□ -0.86
VRK1-206ENST00000557222 EP300Q09472 2414 aaPredicted RBP9.68□□□□□ -0.86
VRK1-206ENST00000557222 CDC14CA4D256 554 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 H0Y858 1186 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CPLX1O14810 134 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 TDP2O95551 362 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 NCLP19338 710 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 KLRC2P26717 231 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CA8P35219 290 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CLCN4P51793 760 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CCT2P78371 535 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 POU5F1BQ06416 359 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 TDGQ13569 410 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 NPY5RQ15761 445 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 AGMOQ6ZNB7 445 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CCDC149Q6ZUS6 474 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 C12orf76Q8N812 135 aaPredicted RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 TMEM105Q8N8V8 129 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 TCP11Q8WWU5 503 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 PRPF31Q8WWY3 499 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 PSPC1Q8WXF1 523 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 LPPQ93052 612 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 NXPE3Q969Y0 559 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 KLHL5Q96PQ7 755 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 RTP3Q9BQQ7 232 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 TM6SF1Q9BZW5 370 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 MFSD1Q9H3U5 465 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 RSAD1Q9HA92 442 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 NCOA5Q9HCD5 579 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 KCNMB3Q9NPA1 279 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 MRPL17Q9NRX2 175 aaKnown RBP9.67□□□□□ -0.86
VRK1-206ENST00000557222 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 FAN1Q9Y2M0 1017 aa9.67□□□□□ -0.86
VRK1-206ENST00000557222 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CDKL5O76039 1030 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 EFEMP2O95967 443 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 SOD2P04179 222 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CNPP09543 421 aaKnown RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 XBP1P17861 261 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 SP100P23497 879 aaPredicted RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 HOXA11P31270 313 aaPredicted RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 NCBP1Q09161 790 aaKnown RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 TOB2Q14106 344 aaPredicted RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 EPHA7Q15375 998 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 LETM2Q2VYF4 491 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 TMC5Q6UXY8 1006 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 ZNF280BQ86YH2 543 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 BCL7CQ8WUZ0 217 aaPredicted RBP9.66□□□□□ -0.86
VRK1-206ENST00000557222 AUTS2Q8WXX7 1259 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 STAMQ92783 540 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 GJA10Q969M2 543 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CEP170P1Q96L14 293 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 NLRP4Q96MN2 994 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 RPS6KC1Q96S38 1066 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 VN1R3Q9BXE9 311 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 RXFP1Q9HBX9 757 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 FAM86C1Q9NVL1 165 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 DNAJB4Q9UDY4 337 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CDH22Q9UJ99 828 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 VAV3Q9UKW4 847 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 DUSP12Q9UNI6 340 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 INPP5FQ9Y2H2 1132 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
VRK1-206ENST00000557222 ZMYM2Q9UBW7 1377 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 TMEM150BA6NC51 233 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 EML1O00423 815 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 NRP1O14786 923 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 DDHD2O94830 711 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 URODP06132 367 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 ASGR2P07307 311 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 WEE2P0C1S8 567 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 AOC1P19801 751 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 POU4F2Q12837 409 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 USP4Q13107 963 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 INF2Q27J81 1249 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 UBXN11Q5T124 520 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 NEK8Q86SG6 692 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 FERMT3Q86UX7 667 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 KSR1Q8IVT5 923 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 SLFN12Q8IYM2 578 aa9.65□□□□□ -0.86
VRK1-206ENST00000557222 RNF168Q8IYW5 571 aaPredicted RBP9.65□□□□□ -0.86
VRK1-206ENST00000557222 PHF20Q9BVI0 1012 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms