RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CAVIN2O95810 425 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 OR1D2P34982 312 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 KPNA1P52294 538 aaPredicted RBP14.01□□□□□ -0.17
PSEN1-220ENST00000557037 FGD1P98174 961 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 PLK5Q496M5 336 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 DGKKQ5KSL6 1271 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 JAKMIP3Q5VZ66 844 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 TXNDC11Q6PKC3 985 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 TTC8Q8TAM2 541 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 HNRNPLLQ8WVV9 542 aaKnown RBP14.01□□□□□ -0.17
PSEN1-220ENST00000557037 PIK3R5Q8WYR1 880 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 ZSWIM3Q96MP5 696 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 PAAF1Q9BRP4 392 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 IL25Q9H293 177 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 TMEM9BQ9NQ34 198 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 TRPV5Q9NQA5 729 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 CFAP46Q8IYW2 2715 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 KALRNO60229 2985 aa14.01□□□□□ -0.17
PSEN1-220ENST00000557037 ATG2BQ96BY7 2078 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 SF3B1O75533 1304 aaKnown RBP eCLIP14□□□□□ -0.176e-7■■■■■ 93.2
PSEN1-220ENST00000557037 IGKV6-21A0A0C4DH24 114 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 SPAARA0A1B0GVQ0 90 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 CAPNS1P04632 268 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 SRGAP2CP0DJJ0 459 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 UVSSAQ2YD98 709 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 PRR16Q569H4 304 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 PKN3Q6P5Z2 889 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 NFXL1Q6ZNB6 911 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 CNNM3Q8NE01 707 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 GLIS3Q8NEA6 775 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 CSGALNACT1Q8TDX6 532 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 LRIG1Q96JA1 1093 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 ZC3H10Q96K80 434 aaKnown RBP14□□□□□ -0.17
PSEN1-220ENST00000557037 ASB16Q96NS5 453 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 CEP89Q96ST8 783 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 CORO1BQ9BR76 489 aa14□□□□□ -0.17
PSEN1-220ENST00000557037 DUSP15Q9H1R2 295 aaPredicted RBP14□□□□□ -0.17
PSEN1-220ENST00000557037 PDCD11Q14690 1871 aaKnown RBP13.99□□□□□ -0.17
PSEN1-220ENST00000557037 NCANO14594 1321 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 WDR27A2RRH5 827 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 SMCO2A6NFE2 343 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 E7EWF7 191 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 PRB1P04280 392 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 CYP21A2P08686 494 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 CALM1P0DP23 149 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 CALM2P0DP24 149 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 CALM3P0DP25 149 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 PTPN2P17706 415 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 RAB33AQ14088 237 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
PSEN1-220ENST00000557037 PON2Q15165 354 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 NCOA7Q8NI08 942 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 SMARCD2Q92925 531 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 URB1O60287 2271 aaKnown RBP13.99□□□□□ -0.17
PSEN1-220ENST00000557037 ABCA7Q8IZY2 2146 aa13.99□□□□□ -0.17
PSEN1-220ENST00000557037 EML5Q05BV3 1969 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 ARNTLO00327 626 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 DCLK1O15075 740 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 AKAP5P24588 427 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 CCR2P41597 374 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 SIM1P81133 766 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 SCAPQ12770 1279 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 AP3B2Q13367 1082 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 PRSS36Q5K4E3 855 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 TMTC3Q6ZXV5 915 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 CHCHD4Q8N4Q1 142 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 GSTCDQ8NEC7 633 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 FAM200AQ8TCP9 573 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 DEPDC1BQ8WUY9 529 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 NIFKQ9BYG3 293 aaKnown RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 AVENQ9NQS1 362 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 POLR3BQ9NW08 1133 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 CACNA2D2Q9NY47 1150 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 RCAN3Q9UKA8 241 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 U3KPZ7 1027 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-220ENST00000557037 GON4LQ3T8J9 2241 aa13.98□□□□□ -0.17
PSEN1-220ENST00000557037 BCLAF3A2AJT9 711 aaKnown RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 CASTOR2A6NHX0 329 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 PATE3B3GLJ2 98 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 MAFO75444 373 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 AKAP3O75969 853 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 STBD1O95210 358 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 KIF4AO95239 1232 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 CYP3A4P08684 503 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 ELF2Q15723 593 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 YAF2Q8IY57 180 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 MB21D2Q8IYB1 491 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 GJA10Q969M2 543 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 CPB2Q96IY4 423 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 NXF3Q9H4D5 531 aaKnown RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 C8orf33Q9H7E9 229 aaPredicted RBP13.97□□□□□ -0.17
PSEN1-220ENST00000557037 GIT1Q9Y2X7 761 aa13.97□□□□□ -0.17
PSEN1-220ENST00000557037 VWA8A3KMH1 1905 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms