RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 FRMPD4Q14CM0 1322 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 UPK3BL1B0FP48 263 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 KLRF2D3W0D1 207 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 UPK3BL2E5RIL1 263 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 BACH1O14867 736 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF263O14978 683 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 MAGEB2O15479 319 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF623O75123 536 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 ATG13O75143 517 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 POU2F2P09086 479 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 JUNDP17535 347 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 RAB27AP51159 221 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 KARSQ15046 597 aaKnown RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 ALX1Q15699 326 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 PABPC1LQ4VXU2 614 aaKnown RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 FAM160B1Q5W0V3 765 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 DESI1Q6ICB0 168 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 TANGO2Q6ICL3 276 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 CCNI2Q6ZMN8 369 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 RTL10Q7L3V2 364 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 TAS1R1Q7RTX1 841 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 RAB44Q7Z6P3 723 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 C11orf74Q86VG3 221 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 MAP4K3Q8IVH8 894 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 MTMR8Q96EF0 704 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 MCRS1Q96EZ8 462 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 SCLT1Q96NL6 688 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 SDF4Q9BRK5 362 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 PLA2G2FQ9BZM2 168 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 LRRCC1Q9C099 1032 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 RNF41Q9H4P4 317 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF334Q9HCZ1 680 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-245ENST00000556958 JADE2Q9NQC1 790 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 DKK4Q9UBT3 224 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 TNNQ9UQP3 1299 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 AKT3Q9Y243 479 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 COL1A2P08123 1366 aa6.51□□□□□ -1.37
ATXN3-245ENST00000556958 PLXNA4Q9HCM2 1894 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 A0A087WV48 116 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 PPP1R11O60927 126 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 DDHD2O94830 711 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 DARSP14868 501 aaKnown RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 TIMP2P16035 220 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 PSMC3P17980 439 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 GDI1P31150 447 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 ABCG1P45844 678 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 OR1G1P47890 313 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 ACTR2P61160 394 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 GRM2Q14416 872 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 USP41Q3LFD5 358 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 ZMYM1Q5SVZ6 1142 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 TWF2Q6IBS0 349 aaKnown RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 CKAP2LQ8IYA6 745 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 CAMKK1Q8N5S9 505 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 CSGALNACT1Q8TDX6 532 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 DEPDC1BQ8WUY9 529 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 SEC62Q99442 399 aaKnown RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 KIF2CQ99661 725 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 INO80BQ9C086 356 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-245ENST00000556958 GDPD2Q9HCC8 539 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 CHST7Q9NS84 486 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 AKAP13Q12802 2813 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 LAMA5O15230 3695 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 LCTP09848 1927 aa6.5□□□□□ -1.37
ATXN3-245ENST00000556958 KALRNO60229 2985 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 PNMA6FA0A0J9YX94 578 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ZNF197O14709 1029 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 CCL16O15467 120 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ANP32CO43423 234 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ATG7O95352 703 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 C22orf31O95567 290 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 C8AP07357 584 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ITGB5P18084 799 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 CTHP32929 405 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ABL2P42684 1182 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 KPNA1P52294 538 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 ATXN3P54252 364 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 IRX4P78413 519 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 CFHR1Q03591 330 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 PIP4P1Q86T03 277 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 HOMER1Q86YM7 354 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 RNF168Q8IYW5 571 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-245ENST00000556958 HDDC3Q8N4P3 179 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
ATXN3-245ENST00000556958 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms