RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 GPR162Q16538 588 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 SLC45A4Q5BKX6 768 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 ZNF410Q86VK4 478 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 SPATA5Q8NB90 893 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 SUN5Q8TC36 379 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 PPP4R1Q8TF05 950 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 EYA1Q99502 592 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 RRN3Q9NYV6 651 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
SHMT2-226ENST00000556825 NBPF26B4DH59 902 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 MAGEB2O15479 319 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 GYG2O15488 501 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 TFPTP0C1Z6 253 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CCDC159P0C7I6 412 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 KRT4P19013 534 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 IL4RP24394 825 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 UBA7P41226 1012 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 STT3AP46977 705 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ZNF132P52740 706 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 AP3M2P53677 418 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 STRN3Q13033 797 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 KCNJ8Q15842 424 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ANKRD20A4Q4UJ75 823 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 POTEHQ6S545 545 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CCDC81Q6ZN84 652 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ARHGEF18Q6ZSZ5 1173 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 VPS52Q8N1B4 723 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 U2AF1L4Q8WU68 220 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 TCF12Q99081 682 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 MRGBPQ9NV56 204 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ZBTB1Q9Y2K1 713 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 RBMX2Q9Y388 322 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 NOC2LQ9Y3T9 749 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ARIH1Q9Y4X5 557 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 SSU72P8A0A1W2PR75 194 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 PLSCR1O15162 318 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 HAUS5O94927 633 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 GH1P01241 217 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CREB1P16220 341 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 TCEA1P23193 301 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 FOXN2P32314 431 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 NOP14P78316 857 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 POU5F1Q01860 360 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 PRKG1Q13976 671 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 MPP2Q14168 576 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 DUPD1Q68J44 220 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 TWF2Q6IBS0 349 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 ITIH5Q86UX2 942 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CENPSQ8N2Z9 138 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CELF4Q9BZC1 486 aaKnown RBP14.64□□□□□ -0.07
SHMT2-226ENST00000556825 AS3MTQ9HBK9 375 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 CNGB3Q9NQW8 809 aa14.64□□□□□ -0.07
SHMT2-226ENST00000556825 RPTORQ8N122 1335 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 TRIM49BA6NDI0 452 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 AQP9O43315 295 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 ENO2P09104 434 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-226ENST00000556825 AMPD1P23109 780 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 ETV3P41162 512 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 LIFRP42702 1097 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 RAP1GDS1P52306 607 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 ADGRG6Q86SQ4 1221 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 LZTR1Q8N653 840 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 DDI1Q8WTU0 396 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 HAUS7Q99871 368 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 TRIM31Q9BZY9 425 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 B3GNT4Q9C0J1 378 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 BLZF1Q9H2G9 400 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 SNX25Q9H3E2 840 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 SEMA4AQ9H3S1 761 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 SLC38A7Q9NVC3 462 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 ERVK-11Q9UQG0 969 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 PCDHB6Q9Y5E3 794 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 CEPT1Q9Y6K0 416 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 C4BP0C0L5 1744 aa14.63□□□□□ -0.07
SHMT2-226ENST00000556825 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 C15orf38-AP3S2A0A0A6YYH1 394 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 GTPBP6O43824 516 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-226ENST00000556825 PHF2O75151 1096 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 CHEK2O96017 543 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 S100BP04271 92 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-226ENST00000556825 ITGA4P13612 1032 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 CDH2P19022 906 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-226ENST00000556825 KLRC1P26715 233 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 ARPINQ7Z6K5 226 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 SCYL3Q8IZE3 742 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 C10orf82Q8WW14 230 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
SHMT2-226ENST00000556825 PTCD3Q96EY7 689 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms