RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PCDHA7Q9UN72 937 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CARNS1A5YM72 827 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 H0YCG3 227 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 MBTPS2O43462 519 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 NR1I2O75469 434 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 TOM1L1O75674 476 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 IDEP14735 1019 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 IGFBP6P24592 240 aaPredicted RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 TNFSF9P41273 254 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 LIG4P49917 911 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 YARSP54577 528 aaKnown RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 SOX4Q06945 474 aaPredicted RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 KCNC3Q14003 757 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 FUT10Q6P4F1 479 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 ZPBP2Q6X784 338 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 RNF168Q8IYW5 571 aaPredicted RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 PPP1R10Q96QC0 940 aaKnown RBP11.35□□□□□ -0.59
SNX6-208ENST00000556712 COLEC11Q9BWP8 271 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 GPR62Q9BZJ7 368 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 HCFC2Q9Y5Z7 792 aa11.35□□□□□ -0.59
SNX6-208ENST00000556712 C2orf16Q68DN1 1984 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.34□□□□□ -0.59
SNX6-208ENST00000556712 CLDN3O15551 220 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 EFEMP2O95967 443 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 PIGRP01833 764 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 URODP06132 367 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 CXCL8P10145 99 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 MYBP10242 640 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 EPCAMP16422 314 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 CASP1P29466 404 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 GLUD2P49448 558 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 CASP5P51878 434 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 GTF2BQ00403 316 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 SPAG1Q07617 926 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 MCL1Q07820 350 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 KCNA1Q09470 495 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 SMAD4Q13485 552 aaKnown RBP11.34□□□□□ -0.59
SNX6-208ENST00000556712 BECN1Q14457 450 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 RESP18Q5W5W9 173 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 SMRP1Q8NCR6 262 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 HPS3Q969F9 1004 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
SNX6-208ENST00000556712 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 MRPL44Q9H9J2 332 aaKnown RBP11.34□□□□□ -0.59
SNX6-208ENST00000556712 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
SNX6-208ENST00000556712 KCNG1Q9UIX4 513 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 CFAP45Q9UL16 551 aa11.34□□□□□ -0.59
SNX6-208ENST00000556712 SMIM28A0A1B0GU29 152 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 FRMD3A2A2Y4 597 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 ANKRD63C9JTQ0 380 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 FAM189A1O60320 539 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 LILRB3O75022 631 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 TADA2AO75478 443 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 PPP1R37O75864 691 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 GCNT3O95395 438 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 CNPP09543 421 aaKnown RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 RPL17P18621 184 aaKnown RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 CLCNKBP51801 687 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 KRT85P78386 507 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 COASYQ13057 564 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 SLC10A6Q3KNW5 377 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 XKR4Q5GH76 650 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 ATL3Q6DD88 541 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 ANKRD54Q6NXT1 300 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 KANK3Q6NY19 840 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 C3orf58Q8NDZ4 430 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 GLIS3Q8NEA6 775 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 KCNN1Q92952 543 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 SPATA32Q96LK8 384 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 KLHL5Q96PQ7 755 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 MSTO1Q9BUK6 570 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 MRPL17Q9NRX2 175 aaKnown RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 TUBGCP4Q9UGJ1 667 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 RCOR1Q9UKL0 485 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 USP15Q9Y4E8 981 aaPredicted RBP11.33□□□□□ -0.6
SNX6-208ENST00000556712 IRAK3Q9Y616 596 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 DENND4AQ7Z401 1863 aa11.33□□□□□ -0.6
SNX6-208ENST00000556712 SF3B1O75533 1304 aaKnown RBP eCLIP11.33□□□□□ -0.65e-7■■■■■ 106.3
SNX6-208ENST00000556712 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
SNX6-208ENST00000556712 A0A0B4J269 797 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms