RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 NUP88Q99567 741 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-221ENST00000556534 CEP72Q9P209 647 aa6.05□□□□□ -1.44
SCFD1-221ENST00000556534 SLC23A1Q9UHI7 598 aa6.05□□□□□ -1.44
SCFD1-221ENST00000556534 CLCA2Q9UQC9 943 aa6.05□□□□□ -1.44
SCFD1-221ENST00000556534 MYBBP1AQ9BQG0 1328 aaKnown RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 E2F8A0AVK6 867 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 MATN3O15232 486 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 IL33O95760 270 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 RAP2AP10114 183 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 PF4V1P10720 104 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 DDCP20711 480 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 CLRN1P58418 232 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 PTH1RQ03431 593 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 NRN1LQ496H8 165 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 SEM1Q6ZVN7 128 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 C1orf210Q8IVY1 113 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 DCBLD1Q8N8Z6 715 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 IFI44Q8TCB0 444 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 NSUN6Q8TEA1 469 aaKnown RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 CACTINQ8WUQ7 758 aaKnown RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 TFAP2CQ92754 450 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 MRI1Q9BV20 369 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 CDH19Q9H159 772 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 TDP1Q9NUW8 608 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 RUVBL1Q9Y265 456 aaKnown RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 MYRFQ9Y2G1 1151 aa6.04□□□□□ -1.44
SCFD1-221ENST00000556534 CFAP20Q9Y6A4 193 aaKnown RBP6.04□□□□□ -1.44
SCFD1-221ENST00000556534 XDHP47989 1333 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 PNPLA7Q6ZV29 1317 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 TEX33O43247 280 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 C1SP09871 688 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 ATP5JP18859 108 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 PTTG1IPP53801 180 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 RRP12Q5JTH9 1297 aaKnown RBP6.03□□□□□ -1.44
SCFD1-221ENST00000556534 CATIPQ7Z7H3 387 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 PLXDC1Q8IUK5 500 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 DRC7Q8IY82 874 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 TMX3Q96JJ7 454 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 MRGPRX4Q96LA9 322 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 CAMKK2Q96RR4 588 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 MYOCQ99972 504 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 NDC1Q9BTX1 674 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 SPON1Q9HCB6 807 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 PCDHB1Q9Y5F3 818 aa6.03□□□□□ -1.44
SCFD1-221ENST00000556534 LEFTY2O00292 366 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 TRIM24O15164 1050 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 INSRRP14616 1297 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 TNFRSF1AP19438 455 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 APOBEC3AP31941 199 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-221ENST00000556534 FXR1P51114 621 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCFD1-221ENST00000556534 CTXN1P60606 82 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 RAP2BP61225 183 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 DSC2Q02487 901 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 MIIPQ5JXC2 388 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ATXN7L2Q5T6C5 722 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-221ENST00000556534 EFCAB12Q6NXP0 572 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 PRR18Q8N4B5 295 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ZFP28Q8NHY6 868 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ZNF503Q96F45 646 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 DMRTA2Q96SC8 542 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 NEU1Q99519 415 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 GTPBP4Q9BZE4 634 aaKnown RBP6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ZIM2Q9NZV7 527 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ZNF180Q9UJW8 692 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 ANKRD6Q9Y2G4 727 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 CHST2Q9Y4C5 530 aa6.02□□□□□ -1.45
SCFD1-221ENST00000556534 DTNBO60941 627 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 ZSCAN20P17040 1043 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-221ENST00000556534 PDCP20941 246 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 MGAT1P26572 445 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 SLC25A3Q00325 362 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 TLE1Q04724 770 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 RAB39AQ14964 217 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 RABL3Q5HYI8 236 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 METRNLQ641Q3 311 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 PPP4R3AQ6IN85 833 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 USP45Q70EL2 814 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 RSPH3Q86UC2 560 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 JPH3Q8WXH2 748 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-221ENST00000556534 JDP2Q8WYK2 163 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 SLC12A5Q9H2X9 1139 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 FBXO34Q9NWN3 711 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 FAM30AQ9NZY2 134 aa6.01□□□□□ -1.45
SCFD1-221ENST00000556534 PNMA8BQ9ULN7 279 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-221ENST00000556534 POU2F2P09086 479 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 VCAM1P19320 739 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 AKAP5P24588 427 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 CHN2P52757 468 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 DGCR2P98153 550 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 NHLH2Q02577 135 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 FOXE3Q13461 319 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 PUM1Q14671 1186 aaKnown RBP eCLIP6□□□□□ -1.45
SCFD1-221ENST00000556534 ZXDCQ2QGD7 858 aaPredicted RBP6□□□□□ -1.45
SCFD1-221ENST00000556534 DACT2Q5SW24 774 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 ZNF529Q6P280 563 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 GGNQ86UU5 652 aa6□□□□□ -1.45
SCFD1-221ENST00000556534 CLPTM1LQ96KA5 538 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms