RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 NHEJ1Q9H9Q4 299 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-206ENST00000556462 DNAJC12Q9UKB3 198 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 EPN1Q9Y6I3 576 aaPredicted RBP11.72□□□□□ -0.53
LINC01550-206ENST00000556462 STAG3L1P0CL83 205 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 MRPS6P82932 125 aaKnown RBP11.72□□□□□ -0.53
LINC01550-206ENST00000556462 PTGISQ16647 500 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 SFMBT2Q5VUG0 894 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 TDRD10Q5VZ19 366 aaKnown RBP11.72□□□□□ -0.53
LINC01550-206ENST00000556462 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 ARHGEF19Q8IW93 802 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 STK33Q9BYT3 514 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 PPP2R2CQ9Y2T4 447 aa11.72□□□□□ -0.53
LINC01550-206ENST00000556462 B4GALT4O60513 344 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 NDUFA10O95299 355 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 VNN1O95497 513 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 CHRNA1P02708 482 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 CLTAP09496 248 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 CXCL8P10145 99 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 CLCN1P35523 988 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.53
LINC01550-206ENST00000556462 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 SURF1Q15526 300 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 WDR49Q8IV35 697 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 GLT1D1Q96MS3 346 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 SPAG5Q96R06 1193 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
LINC01550-206ENST00000556462 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
LINC01550-206ENST00000556462 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 CDY2AQ9Y6F7 541 aa11.71□□□□□ -0.53
LINC01550-206ENST00000556462 A0A1W2PQ45 241 aaPredicted RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 A0A1W2PQY0 241 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 RFX1P22670 979 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 AXLP30530 894 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 MGAT3Q09327 533 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 DRAP1Q14919 205 aaPredicted RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 MTFR1Q15390 333 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 ASTE1Q2TB18 679 aaPredicted RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 RSPH3Q86UC2 560 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 SLC43A3Q8NBI5 491 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 HELQQ8TDG4 1101 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 ELMO3Q96BJ8 720 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 FAM212AQ96EL1 285 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 ADPGKQ9BRR6 497 aa11.71□□□□□ -0.54
LINC01550-206ENST00000556462 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 NOC2LQ9Y3T9 749 aaKnown RBP11.71□□□□□ -0.54
LINC01550-206ENST00000556462 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 F8VZ95 297 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 CST3P01034 146 aaPredicted RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 HLA-DRAP01903 254 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 SERPING1P05155 500 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 PNMA6AP0CW24 399 aaPredicted RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 EIF4A3P38919 411 aaKnown RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 AP3M2P53677 418 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 MAPK8IP2Q13387 824 aaPredicted RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 KYAT1Q16773 422 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 SLC27A1Q6PCB7 646 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 ACRBPQ8NEB7 543 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 DHX38Q92620 1227 aaKnown RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 KAT5Q92993 513 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 TATDN2Q93075 761 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 EIF2AQ9BY44 585 aaKnown RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 REXO2Q9Y3B8 237 aaKnown RBP11.7□□□□□ -0.54
LINC01550-206ENST00000556462 TRPV2Q9Y5S1 764 aa11.7□□□□□ -0.54
LINC01550-206ENST00000556462 A0A0U1RQJ8 604 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 FOXN3O00409 490 aaPredicted RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 IL18RAPO95256 599 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 NPTXRO95502 500 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 RPLP2P05387 115 aaKnown RBP11.69□□□□□ -0.54
LINC01550-206ENST00000556462 SOX5P35711 763 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 GRM5P41594 1212 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 PRKCIP41743 596 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 STAT1P42224 750 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ARID5AQ03989 594 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 PTK7Q13308 1070 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 BIRC3Q13489 604 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
LINC01550-206ENST00000556462 DUOXA2Q1HG44 320 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms