RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 DNAJB1P25685 340 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 ABCD1P33897 745 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 HOXD13P35453 343 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 GRM5P41594 1212 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 SYKP43405 635 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 BCAR1P56945 870 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 PLCB3Q01970 1234 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 DSC1Q08554 894 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 KCNA1Q09470 495 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 COASYQ13057 564 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 CUL4BQ13620 913 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 MPZL3Q6UWV2 235 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 ALKAL1Q6UXT8 129 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 UNC13DQ70J99 1090 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 CCDC65Q8IXS2 484 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 GRAMD1CQ8IYS0 662 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 HACE1Q8IYU2 909 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 CEP120Q8N960 986 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 ENGASEQ8NFI3 743 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 HPS3Q969F9 1004 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 MRPL38Q96DV4 380 aaKnown RBP10.57□□□□□ -0.72
SRP54-210ENST00000556380 ADPGKQ9BRR6 497 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 C11orf84Q9BUA3 381 aaPredicted RBP10.57□□□□□ -0.72
SRP54-210ENST00000556380 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 IKZF4Q9H2S9 585 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 MRPL44Q9H9J2 332 aaKnown RBP10.57□□□□□ -0.72
SRP54-210ENST00000556380 ALG13Q9NP73 1137 aaKnown RBP10.57□□□□□ -0.72
SRP54-210ENST00000556380 AAASQ9NRG9 546 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 KLK14Q9P0G3 267 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 TBC1D7Q9P0N9 293 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 INPP5FQ9Y2H2 1132 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 PCDHB12Q9Y5F1 795 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 STYXL1Q9Y6J8 313 aa10.57□□□□□ -0.72
SRP54-210ENST00000556380 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 A0A0B4J269 797 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 PTGESO14684 152 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 FGF18O76093 207 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 ZNF202O95125 648 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 EFEMP2O95967 443 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 MYBP10242 640 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 IGFBP4P22692 258 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 ADSSP30520 456 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 PBX3P40426 434 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 MLH1P40692 756 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 AFMP43652 599 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 SLC11A1P49279 550 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 SCNN1GP51170 649 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 SNW1Q13573 536 aaKnown RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 NAB2Q15742 525 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 TMEM132AQ24JP5 1023 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 L1TD1Q5T7N2 865 aaKnown RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 EPM2AIP1Q7L775 607 aaPredicted RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 ZBTB33Q86T24 672 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 TMEM173Q86WV6 379 aaPredicted RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 COLGALT2Q8IYK4 626 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 CEP57L1Q8IYX8 460 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 SLC39A11Q8N1S5 342 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 GLIS3Q8NEA6 775 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 URGCPQ8TCY9 931 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 BCL7CQ8WUZ0 217 aaPredicted RBP10.56□□□□□ -0.72
SRP54-210ENST00000556380 HVCN1Q96D96 273 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 ZNF558Q96NG5 402 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 LMAN2LQ9H0V9 348 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 DNAJB4Q9UDY4 337 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 PARP2Q9UGN5 583 aa10.56□□□□□ -0.72
SRP54-210ENST00000556380 TISP43B9A030 160 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 CLDN3O15551 220 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 GADD45BO75293 160 aaPredicted RBP10.55□□□□□ -0.72
SRP54-210ENST00000556380 ADRB2P07550 413 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 ASIC1P78348 528 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 UBE3AQ05086 875 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 ALCAMQ13740 583 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 NOLC1Q14978 699 aaKnown RBP eCLIP10.55□□□□□ -0.72
SRP54-210ENST00000556380 SLC10A6Q3KNW5 377 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 ZNF568Q3ZCX4 644 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 SPOUT1Q5T280 376 aaKnown RBP10.55□□□□□ -0.72
SRP54-210ENST00000556380 KRBA2Q6ZNG9 492 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 CLEC17AQ6ZS10 378 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 IGSF21Q96ID5 467 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 IPO9Q96P70 1041 aaKnown RBP10.55□□□□□ -0.72
SRP54-210ENST00000556380 TMEM175Q9BSA9 504 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 VN1R3Q9BXE9 311 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 LZTS1Q9Y250 596 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 GDAQ9Y2T3 454 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 MYH11P35749 1972 aa10.55□□□□□ -0.72
SRP54-210ENST00000556380 SMIM28A0A1B0GU29 152 aa10.54□□□□□ -0.72
SRP54-210ENST00000556380 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms