RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 HVCN1Q96D96 273 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 PPP1R10Q96QC0 940 aaKnown RBP16.6■□□□□ 0.25
ACTN1-217ENST00000556203 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 FGFBP2Q9BYJ0 223 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 OLFML3Q9NRN5 406 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 MYO7AQ13402 2215 aa16.6■□□□□ 0.25
ACTN1-217ENST00000556203 TRANK1O15050 2925 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-217ENST00000556203 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-217ENST00000556203 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-217ENST00000556203 TBX10O75333 385 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 LTBRP36941 435 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 NDUFV1P49821 464 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-217ENST00000556203 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
ACTN1-217ENST00000556203 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 C7orf25Q9BPX7 421 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 MSTO1Q9BUK6 570 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 HERC2P3Q9BVR0 1158 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 BLZF1Q9H2G9 400 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
ACTN1-217ENST00000556203 A0A0B4J269 797 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 TISP43B9A030 160 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ANKRD63C9JTQ0 380 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 TADA2AO75478 443 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 GLP2RO95838 553 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 SOD2P04179 222 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 CLTAP09496 248 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 CXCL8P10145 99 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 BMP1P13497 986 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 KCNE1P15382 129 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 CASP1P29466 404 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 TNFSF9P41273 254 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 AFMP43652 599 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 KCNA1Q09470 495 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 SLC10A6Q3KNW5 377 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 L1TD1Q5T7N2 865 aaKnown RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 CNNM4Q6P4Q7 775 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 TAS1R1Q7RTX1 841 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 GRAMD1CQ8IYS0 662 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 RNF168Q8IYW5 571 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 HASPINQ8TF76 798 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 HPS3Q969F9 1004 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ZMAT2Q96NC0 199 aaKnown RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 IKZF4Q9H2S9 585 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 CNTN3Q9P232 1028 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 BARX2Q9UMQ3 279 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-217ENST00000556203 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 HPSEQ9Y251 543 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
ACTN1-217ENST00000556203 MYH11P35749 1972 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 A0A1W2PQD8 194 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 OGTO15294 1046 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 ACTN4O43707 911 aaKnown RBP16.57■□□□□ 0.24
ACTN1-217ENST00000556203 FAM189A1O60320 539 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 CLASP2O75122 1294 aaKnown RBP16.57■□□□□ 0.24
ACTN1-217ENST00000556203 KIF4AO95239 1232 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 EFEMP2O95967 443 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 URODP06132 367 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 ALCAMQ13740 583 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 CLUL1Q15846 466 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 KYAT1Q16773 422 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 SLFN12LQ6IEE8 588 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 PAGE5Q96GU1 130 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 GPR62Q9BZJ7 368 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 PLEKHA5Q9HAU0 1116 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 GOLGA2P5Q9HBQ8 144 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 MRPL17Q9NRX2 175 aaKnown RBP16.57■□□□□ 0.24
ACTN1-217ENST00000556203 SLC38A7Q9NVC3 462 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 CLEC1BQ9P126 229 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 IRAK3Q9Y616 596 aa16.57■□□□□ 0.24
ACTN1-217ENST00000556203 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 SF3B1O75533 1304 aaKnown RBP eCLIP16.56■□□□□ 0.249e-6■■■■■ 68.9
ACTN1-217ENST00000556203 FAM237AA0A1B0GTK4 181 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 C2CD2LO14523 706 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 PRPF6O94906 941 aaKnown RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 SYKP43405 635 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 GLUD2P49448 558 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 CLCNKBP51801 687 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 NDUFA8P51970 172 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 SOX4Q06945 474 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms