RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TUFT1Q9NNX1 390 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ARHGEF3Q9NR81 526 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 R4GN57 208 aa15.88■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PDCD11Q14690 1871 aaKnown RBP15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ANKRD1Q15327 319 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PSMD5Q16401 504 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MCPH1Q8NEM0 835 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ITFG1Q8TB96 612 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PPP1R10Q96QC0 940 aaKnown RBP15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 DDX23Q9BUQ8 820 aaKnown RBP15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 KIFC3Q9BVG8 833 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FOXQ1Q9C009 403 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PIDD1Q9HB75 910 aa15.87■□□□□ 0.13
CHMP4BP1-201ENST00000556017 COL4A2P08572 1712 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SHISA7A6NL88 538 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ACKR2O00590 384 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 N4BP3O15049 544 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 THP07101 528 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CYP11B2P19099 503 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ATP2B1P20020 1258 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FSHRP23945 695 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 HOXA9P31269 272 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MCM7P33993 719 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 STARD6P59095 220 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GPC5P78333 572 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CREMQ03060 361 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NT5DC1Q5TFE4 455 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ELMSAN1Q6PJG2 1045 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 C4orf32Q8N8J7 132 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 C3orf58Q8NDZ4 430 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PJA1Q8NG27 643 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FGF13Q92913 245 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 BRMS1Q9HCU9 246 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 HCFC1R1Q9NWW0 138 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CDH7Q9ULB5 785 aa15.86■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CITO14578 2027 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 TMEM189-UBE2V1I3L0A0 370 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MEFVO15553 781 aaPredicted RBP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PRKCBP05771 671 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 C8AP07357 584 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 HNRNPA1P09651 372 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FGFR3P22607 806 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 RPA1P27694 616 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GUCY1B3Q02153 619 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SOX4Q06945 474 aaPredicted RBP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PRPF4BQ13523 1007 aaKnown RBP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 RAB33AQ14088 237 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 DCLRE1AQ6PJP8 1040 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 PADI6Q6TGC4 694 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NACC1Q96RE7 527 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MTRRQ9UBK8 725 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SIT1Q9Y3P8 196 aa15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 MTF2Q9Y483 593 aaPredicted RBP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 ZFP37Q9Y6Q3 630 aaPredicted RBP15.85■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NRG2O14511 850 aaPredicted RBP15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CCL16O15467 120 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 POU2F2P09086 479 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SP9P0CG40 484 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 OR1D2P34982 312 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 NAMPTP43490 491 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 FOXK2Q01167 660 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GLRA4Q5JXX5 417 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 SPECC1Q5M775 1068 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CEP57Q86XR8 500 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 DAW1Q8N136 415 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CEP120Q8N960 986 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GOLGA2P5Q9HBQ8 144 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 DNMT3BQ9UBC3 853 aaKnown RBP15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
CHMP4BP1-201ENST00000556017 STK25O00506 426 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 SEC24BO95487 1268 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 RBM25P49756 843 aaKnown RBP15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 CLCNKBP51801 687 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 MAPK6Q16659 721 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 UPP1Q16831 310 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 SLC5A9Q2M3M2 681 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 PPM1LQ5SGD2 360 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 AXDND1Q5T1B0 1012 aaPredicted RBP15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 TAS1R3Q7RTX0 852 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 C1orf210Q8IVY1 113 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 ZBTB8OSQ8IWT0 167 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 NPAS3Q8IXF0 933 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 SLC7A14Q8TBB6 771 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 F5P12259 2224 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 NCOR2Q9Y618 2525 aa15.83■□□□□ 0.12
CHMP4BP1-201ENST00000556017 I3L4J1 428 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 ABLIM1O14639 778 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 TBC1D4O60343 1298 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 LMNAP02545 664 aaKnown RBP15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 TKTP29401 623 aaKnown RBP15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 BRCC3P46736 316 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 ID4P47928 161 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 NEK4P51957 841 aa15.82■□□□□ 0.12
CHMP4BP1-201ENST00000556017 SNW1Q13573 536 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms