RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 DLATP10515 647 aaKnown RBP11.97□□□□□ -0.49
TMEM260-208ENST00000555905 RAG1P15918 1043 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 GTF2H1P32780 548 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 DSC3Q14574 896 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 NR1I3Q14994 352 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 ENOX2Q16206 610 aaKnown RBP11.97□□□□□ -0.49
TMEM260-208ENST00000555905 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 MIIPQ5JXC2 388 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 CEP120Q8N960 986 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 PARD3BQ8TEW8 1205 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 SLC35C1Q96A29 364 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 MRFAP1L1Q96HT8 127 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 SCLYQ96I15 445 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 HTATIP2Q9BUP3 242 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 WNT8AQ9H1J5 351 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
TMEM260-208ENST00000555905 TOPORSQ9NS56 1045 aaPredicted RBP11.97□□□□□ -0.49
TMEM260-208ENST00000555905 FAM105AQ9NUU6 356 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 IPPQ9Y573 584 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 CITO14578 2027 aa11.97□□□□□ -0.49
TMEM260-208ENST00000555905 SCN5AQ14524 2016 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 ANK1P16157 1881 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 RALGAPA2Q2PPJ7 1873 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 LRRIQ3A6PVS8 624 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-208ENST00000555905 CXCL10P02778 98 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM49P0CI25 452 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM49CP0CI26 452 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 CXCL8P10145 99 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TNNI1P19237 187 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 AP3M2P53677 418 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-208ENST00000555905 DLG4P78352 724 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 CETN1Q12798 172 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 WDR49Q8IV35 697 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 CD302Q8IX05 232 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-208ENST00000555905 PGBD4Q96DM1 585 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 CGRRF1Q99675 332 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 MMRN2Q9H8L6 949 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 PDE11AQ9HCR9 933 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 RGS18Q9NS28 235 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 SNTG2Q9NY99 539 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 PARP2Q9UGN5 583 aa11.96□□□□□ -0.49
TMEM260-208ENST00000555905 ALPK3Q96L96 1907 aa11.96□□□□□ -0.5
TMEM260-208ENST00000555905 A0A0U1RQF3 1178 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 LACTBL1A8MY62 500 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 TEX33O43247 280 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 MGEA5O60502 916 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 ZNF623O75123 536 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 RECQL4O94761 1208 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 C7P10643 843 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 ITGA4P13612 1032 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 GCLMP48507 274 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 FMO5P49326 533 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 CLDN10P78369 228 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 MYL7Q01449 175 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 GPNMBQ14956 572 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 DEFB128Q7Z7B8 93 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 DRC7Q8IY82 874 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM192Q8IY95 271 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
TMEM260-208ENST00000555905 SMG8Q8ND04 991 aaKnown RBP11.95□□□□□ -0.5
TMEM260-208ENST00000555905 PLEKHO2Q8TD55 490 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 CACTINQ8WUQ7 758 aaKnown RBP11.95□□□□□ -0.5
TMEM260-208ENST00000555905 TSPAN18Q96SJ8 248 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 POP1Q99575 1024 aaKnown RBP11.95□□□□□ -0.5
TMEM260-208ENST00000555905 ASB7Q9H672 318 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 UBN1Q9NPG3 1134 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 HES2Q9Y543 173 aa11.95□□□□□ -0.5
TMEM260-208ENST00000555905 A0A1W2PQC6 194 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 GTPBP10A4D1E9 387 aaKnown RBP11.94□□□□□ -0.5
TMEM260-208ENST00000555905 P4HA2O15460 535 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 EVI5O60447 810 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 EOMESO95936 686 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 TNNC2P02585 160 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 PFKMP08237 780 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 IBSPP21815 317 aaPredicted RBP11.94□□□□□ -0.5
TMEM260-208ENST00000555905 AKAP5P24588 427 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 CDC25BP30305 580 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 MXI1P50539 228 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 PPP3CAQ08209 521 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 KRT39Q6A163 491 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 MFSD5Q6N075 450 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 CNKSR3Q6P9H4 555 aa11.94□□□□□ -0.5
TMEM260-208ENST00000555905 GBP6Q6ZN66 633 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms