RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CCDC188H7C350 402 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 MARCKSL1P49006 195 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 NNTQ13423 1086 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 HSDL1Q3SXM5 330 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 SEZ6Q53EL9 994 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 NAA35Q5VZE5 725 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 SPOPLQ6IQ16 392 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 RNPC3Q96LT9 517 aaKnown RBP26.1■■□□□ 1.77
TMEM260-207ENST00000555497 CARD9Q9H257 536 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 AMACRQ9UHK6 382 aa26.1■■□□□ 1.77
TMEM260-207ENST00000555497 ZC3H11AO75152 810 aaKnown RBP eCLIP26.09■■□□□ 1.77
TMEM260-207ENST00000555497 MAFO75444 373 aaPredicted RBP26.09■■□□□ 1.77
TMEM260-207ENST00000555497 MTA2O94776 668 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 MARK3P27448 753 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 GUCY2FP51841 1108 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 MESDQ14696 234 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 SCARA3Q6AZY7 606 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 DDX42Q86XP3 938 aaKnown RBP eCLIP26.09■■□□□ 1.77
TMEM260-207ENST00000555497 BTBD6Q96KE9 485 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 MSTO1Q9BUK6 570 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 FAM204AQ9H8W3 233 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 ADGRA2Q96PE1 1338 aa26.09■■□□□ 1.77
TMEM260-207ENST00000555497 ADCY3O60266 1144 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 SLC25A27O95847 323 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 CYP1A2P05177 515 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 ECHS1P30084 290 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 TMEM63BQ5T3F8 832 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 PRPF31Q8WWY3 499 aaKnown RBP26.08■■□□□ 1.77
TMEM260-207ENST00000555497 GPR20Q99678 358 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 TMEM134Q9H6X4 195 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 C1orf112Q9NSG2 853 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 RBAKQ9NYW8 714 aaPredicted RBP26.08■■□□□ 1.77
TMEM260-207ENST00000555497 PPIL2Q13356 520 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 MKRN4PQ13434 485 aaPredicted RBP26.08■■□□□ 1.77
TMEM260-207ENST00000555497 SLFN12LQ6IEE8 588 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 ADAT2Q7Z6V5 191 aaKnown RBP26.08■■□□□ 1.77
TMEM260-207ENST00000555497 OPTNQ96CV9 577 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 PSD3Q9NYI0 1048 aa26.08■■□□□ 1.77
TMEM260-207ENST00000555497 DIS3Q9Y2L1 958 aaKnown RBP26.08■■□□□ 1.77
TMEM260-207ENST00000555497 DNAJC25-GNG10A0A024R161 153 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 COMTP21964 271 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 POU5F1Q01860 360 aaKnown RBP26.07■■□□□ 1.76
TMEM260-207ENST00000555497 GPAT2Q6NUI2 795 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 ENOSF1Q7L5Y1 443 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 NUP85Q9BW27 656 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 CELF4Q9BZC1 486 aaKnown RBP26.07■■□□□ 1.76
TMEM260-207ENST00000555497 TAF1DQ9H5J8 278 aaPredicted RBP26.07■■□□□ 1.76
TMEM260-207ENST00000555497 TRPC6Q9Y210 931 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 CNTNAP2Q9UHC6 1331 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 ZBTB42B2RXF5 422 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 KIAA0391O15091 583 aaKnown RBP26.07■■□□□ 1.76
TMEM260-207ENST00000555497 LMAN1P49257 510 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 ACAD10Q6JQN1 1059 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 ZNF653Q96CK0 615 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 APOBEC3GQ9HC16 384 aaKnown RBP26.07■■□□□ 1.76
TMEM260-207ENST00000555497 ERVK-5Q9HDB9 667 aa26.07■■□□□ 1.76
TMEM260-207ENST00000555497 COPB2P35606 906 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 PIK3CAP42336 1068 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 BIRC3Q13489 604 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 CLEC16AQ2KHT3 1053 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 CELF3Q5SZQ8 465 aaKnown RBP26.06■■□□□ 1.76
TMEM260-207ENST00000555497 OR5B17Q8NGF7 314 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 TTI1O43156 1089 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 HARSP12081 509 aaKnown RBP26.06■■□□□ 1.76
TMEM260-207ENST00000555497 SCP2P22307 547 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.06■■□□□ 1.76
TMEM260-207ENST00000555497 FBXO16Q8IX29 292 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-207ENST00000555497 ZNF564Q8TBZ8 553 aaPredicted RBP26.06■■□□□ 1.76
TMEM260-207ENST00000555497 GLG1Q92896 1179 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 COPS5Q92905 334 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 SH3GL2Q99962 352 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 SLITRK6Q9H5Y7 841 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 AZI2Q9H6S1 392 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 GTF3C4Q9UKN8 822 aa26.06■■□□□ 1.76
TMEM260-207ENST00000555497 NF2P35240 595 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 PEX5P50542 639 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 WDR44Q5JSH3 913 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 PIK3R5Q8WYR1 880 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 CD101Q93033 1021 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 RPS6KC1Q96S38 1066 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 MMP19Q99542 508 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 ZSWIM1Q9BR11 485 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 NEUROG2Q9H2A3 272 aa26.05■■□□□ 1.76
TMEM260-207ENST00000555497 LGR5O75473 907 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 GJA5P36382 358 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 ALS2CLQ60I27 953 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 LRRC71Q8N4P6 559 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 ZIM3Q96PE6 472 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 MIF4GDA9UHW6 222 aaKnown RBP26.04■■□□□ 1.76
TMEM260-207ENST00000555497 MSCO60682 206 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 LDHAP00338 332 aaKnown RBP26.04■■□□□ 1.76
TMEM260-207ENST00000555497 ACO1P21399 889 aaKnown RBP26.04■■□□□ 1.76
TMEM260-207ENST00000555497 TNFSF9P41273 254 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 IQCKQ8N0W5 287 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 MREGQ8N565 214 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 WHAMMQ8TF30 809 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 CGRRF1Q99675 332 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 CCDC113Q9H0I3 377 aa26.04■■□□□ 1.76
TMEM260-207ENST00000555497 UNGP13051 313 aaPredicted RBP26.03■■□□□ 1.76
TMEM260-207ENST00000555497 KCTD2Q14681 263 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms