RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TATDN2Q93075 761 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 INTS2Q9H0H0 1204 aaKnown RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 PTPRJQ12913 1337 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 NFICP08651 508 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 PON1P27169 355 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 CDC42EP1Q00587 391 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 MTF1Q14872 753 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 DNTTIP2Q5QJE6 756 aaKnown RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 KRT39Q6A163 491 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 SLC27A1Q6PCB7 646 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 CHP1Q99653 195 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 BAG1Q99933 345 aaPredicted RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
NEK9-205ENST00000555405 DNAJC12Q9UKB3 198 aa11.03□□□□□ -0.64
NEK9-205ENST00000555405 RECQL4O94761 1208 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 TNNC2P02585 160 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 ABCD1P33897 745 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 GSDMDP57764 484 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 PAN2Q504Q3 1202 aaKnown RBP11.02□□□□□ -0.64
NEK9-205ENST00000555405 JADE1Q6IE81 842 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 SEMA4DQ92854 862 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 MMS19Q96T76 1030 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 TSEN34Q9BSV6 310 aaKnown RBP11.02□□□□□ -0.64
NEK9-205ENST00000555405 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.64
NEK9-205ENST00000555405 KCNF1Q9H3M0 494 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 HIPK3Q9H422 1215 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.64
NEK9-205ENST00000555405 A0A1B0GUA9 196 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 LRRC53A6NM62 1247 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
NEK9-205ENST00000555405 GFPT2O94808 682 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 CSPG5O95196 566 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 CST3P01034 146 aaPredicted RBP11.02□□□□□ -0.65
NEK9-205ENST00000555405 HLA-DRAP01903 254 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 CLTAP09496 248 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 CDC25BP30305 580 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 MCL1Q07820 350 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 DNAAF5Q86Y56 855 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 ANKRD36BP1Q96IX9 119 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 IMPG2Q9BZV3 1241 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 SOWAHDA6NJG2 315 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 TMCO5BA8MYB1 307 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 GPR182O15218 404 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 POMCP01189 267 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 PTK7Q13308 1070 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 DUOXA2Q1HG44 320 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 TC2NQ8N9U0 490 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 FBXL13Q8NEE6 735 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 DBF4BQ8NFT6 615 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 OR8K1Q8NGG5 319 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 C18orf25Q96B23 403 aaPredicted RBP11.02□□□□□ -0.65
NEK9-205ENST00000555405 PRIMPOLQ96LW4 560 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 GAD1Q99259 594 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 ACP6Q9NPH0 428 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 RAB20Q9NX57 234 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 PHF24Q9UPV7 400 aa11.02□□□□□ -0.65
NEK9-205ENST00000555405 CNTNAP2Q9UHC6 1331 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 ITGB3P05106 788 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 PLEKP08567 350 aaPredicted RBP11.01□□□□□ -0.65
NEK9-205ENST00000555405 AFF1P51825 1210 aaKnown RBP11.01□□□□□ -0.65
NEK9-205ENST00000555405 MYL6P60660 151 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 LPIN1Q14693 890 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 SLC10A6Q3KNW5 377 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 TAF3Q5VWG9 929 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 TRIM65Q6PJ69 517 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 ARHGEF19Q8IW93 802 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 BORCS6Q96GS4 357 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 OGDHLQ9ULD0 1010 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 SIK3Q9Y2K2 1263 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 PCDHB2Q9Y5E7 798 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 MFAP3LO75121 409 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 UCHL3P15374 230 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 ORC1Q13415 861 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 NCOA4Q13772 614 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 FBXO47Q5MNV8 452 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 TDRD10Q5VZ19 366 aaKnown RBP11.01□□□□□ -0.65
NEK9-205ENST00000555405 TRAPPC11Q7Z392 1133 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 BRSK2Q8IWQ3 736 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 C12orf56Q8IXR9 622 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 CCDC150Q8NCX0 1101 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 ERGIC2Q96RQ1 377 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 CPSF3Q9UKF6 684 aaKnown RBP11.01□□□□□ -0.65
NEK9-205ENST00000555405 IPPQ9Y573 584 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
NEK9-205ENST00000555405 AKR1B10O60218 316 aa11□□□□□ -0.65
NEK9-205ENST00000555405 WEE2P0C1S8 567 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MCF2P10911 925 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms