RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 BRSK2Q8IWQ3 736 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 LRRC43Q8N309 656 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 NAT10Q9H0A0 1025 aaKnown RBP15.53■□□□□ 0.08
CHD8-208ENST00000555301 ASB7Q9H672 318 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 CNTN3Q9P232 1028 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 PCDHA11Q9Y5I1 949 aa15.53■□□□□ 0.08
CHD8-208ENST00000555301 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.53■□□□□ 0.08
CHD8-208ENST00000555301 GRXCR1A8MXD5 290 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 MAPK13O15264 365 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 THP07101 528 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 KCNE1P15382 129 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 PSMC2P35998 433 aaKnown RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 GATMP50440 423 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 SCNN1GP51170 649 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 SMAD3P84022 425 aaKnown RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 GRIK3Q13003 919 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 SURF1Q15526 300 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 LRIT3Q3SXY7 679 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 PAN2Q504Q3 1202 aaKnown RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 ZC3H3Q8IXZ2 948 aaKnown RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 RDH13Q8NBN7 331 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 GSTCDQ8NEC7 633 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 ZSWIM2Q8NEG5 633 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
CHD8-208ENST00000555301 FAM212AQ96EL1 285 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 CEP63Q96MT8 703 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 MKNK1Q9BUB5 465 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 DERAQ9Y315 318 aa15.52■□□□□ 0.08
CHD8-208ENST00000555301 SMIM28A0A1B0GU29 152 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 CARNS1A5YM72 827 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 LACTBL1A8MY62 500 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 PTGESO14684 152 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 SLC16A3O15427 465 aaKnown RBP15.51■□□□□ 0.07
CHD8-208ENST00000555301 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
CHD8-208ENST00000555301 AKAP3O75969 853 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 POMCP01189 267 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 RABGGTBP53611 331 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
CHD8-208ENST00000555301 USP37Q86T82 979 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 NT5DC4Q86YG4 428 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 FIBCD1Q8N539 461 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 MFSD14AQ96MC6 490 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 FAM193BQ96PV7 902 aaPredicted RBP15.51■□□□□ 0.07
CHD8-208ENST00000555301 DUSP9Q99956 384 aaKnown RBP15.51■□□□□ 0.07
CHD8-208ENST00000555301 FUCA2Q9BTY2 467 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 PBX4Q9BYU1 374 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 SLC38A7Q9NVC3 462 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 TBC1D13Q9NVG8 400 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 MIOSQ9NXC5 875 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 C2CD2Q9Y426 696 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
CHD8-208ENST00000555301 MEFVO15553 781 aaPredicted RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 CAVIN2O95810 425 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 GNA14O95837 355 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 EPB41P11171 864 aaKnown RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 CASP4P49662 377 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 AFF1P51825 1210 aaKnown RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 ENPEPQ07075 957 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 PSMD6Q15008 389 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 LRRC55Q6ZSA7 311 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 INTS8Q75QN2 995 aaKnown RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 FILIP1Q7Z7B0 1213 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 FAM186BQ8IYM0 893 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 ENOX1Q8TC92 643 aaKnown RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 KIF12Q96FN5 646 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 PPP1R10Q96QC0 940 aaKnown RBP15.5■□□□□ 0.07
CHD8-208ENST00000555301 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 DNAJC25Q9H1X3 360 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 PDE4DIPQ5VU43 2346 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 TTC3P53804 2025 aa15.5■□□□□ 0.07
CHD8-208ENST00000555301 KRT13P13646 458 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 TUSC3Q13454 348 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 TMEM132DQ14C87 1099 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 ANO6Q4KMQ2 910 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 GLRA4Q5JXX5 417 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 SPOUT1Q5T280 376 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 SPATA1Q5VX52 437 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 C11orf57Q6ZUT1 292 aaPredicted RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 CACTINQ8WUQ7 758 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 MED15Q96RN5 788 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 BPIFA3Q9BQP9 254 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 SRRTQ9BXP5 876 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 METTL14Q9HCE5 456 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 PDE11AQ9HCR9 933 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 AAASQ9NRG9 546 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 UBQLN1Q9UMX0 589 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 RWDD3Q9Y3V2 267 aa15.49■□□□□ 0.07
CHD8-208ENST00000555301 MRPL42Q9Y6G3 142 aaKnown RBP15.49■□□□□ 0.07
CHD8-208ENST00000555301 COL4A6Q14031 1691 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 LCHNA4D1U4 455 aa15.48■□□□□ 0.07
CHD8-208ENST00000555301 TULP1O00294 542 aaPredicted RBP15.48■□□□□ 0.07
CHD8-208ENST00000555301 CA3P07451 260 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms