RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 IL18RAPO95256 599 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 MARSP56192 900 aaKnown RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 CLDN10P78369 228 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 CYP24A1Q07973 514 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 PSMD6Q15008 389 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 SHHQ15465 462 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 INTS8Q75QN2 995 aaKnown RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 BRSK2Q8IWQ3 736 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 FAM186BQ8IYM0 893 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 FAM200AQ8TCP9 573 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 PARD3BQ8TEW8 1205 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 LPPQ93052 612 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 APOL6Q9BWW8 343 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 UBE2OQ9C0C9 1292 aaKnown RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 RSAD1Q9HA92 442 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 SAMSN1Q9NSI8 373 aaKnown RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 RBAKQ9NYW8 714 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 CXXC1Q9P0U4 656 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 KANSL3Q9P2N6 904 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 SIP14410 1827 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 SMIM28A0A1B0GU29 152 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 RECQL4O94761 1208 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 UPP2O95045 317 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 CXCL8P10145 99 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 EPB41P11171 864 aaKnown RBP11.07□□□□□ -0.64
SYNE2-215ENST00000554997 FGFR1P11362 822 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 KRT13P13646 458 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 KCNE1P15382 129 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 VAMP7P51809 220 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 DEFB103AP81534 67 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 C9orf50Q5SZB4 431 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 USP37Q86T82 979 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 NT5DC4Q86YG4 428 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 FAM114A1Q8IWE2 563 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 AOPEPQ8N6M6 819 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 ZNF689Q96CS4 500 aaPredicted RBP11.07□□□□□ -0.64
SYNE2-215ENST00000554997 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 SNX27Q96L92 541 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 CASD1Q96PB1 797 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 SLC9A7Q96T83 725 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 GAD1Q99259 594 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 HSD3B7Q9H2F3 369 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 PDE11AQ9HCR9 933 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 MIOSQ9NXC5 875 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 CNTN3Q9P232 1028 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 ARMCX3Q9UH62 379 aaPredicted RBP11.07□□□□□ -0.64
SYNE2-215ENST00000554997 DERAQ9Y315 318 aa11.07□□□□□ -0.64
SYNE2-215ENST00000554997 GJB5O95377 273 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 THP07101 528 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 ZNF18P17022 549 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 CDK11BP21127 795 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 EEF1GP26641 437 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 AFF1P51825 1210 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 AP3M2P53677 418 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 BFSP1Q12934 665 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 DUOXA2Q1HG44 320 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 CCDC40Q4G0X9 1142 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 TCP11X2Q5H9J9 407 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 NOMO2Q5JPE7 1267 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 LUZP1Q86V48 1076 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 GAS2L3Q86XJ1 694 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 HELQQ8TDG4 1101 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 CACTINQ8WUQ7 758 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 ZFP42Q96MM3 310 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 ZMAT2Q96NC0 199 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 FNBP1Q96RU3 617 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 POP1Q99575 1024 aaKnown RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 CXCL16Q9H2A7 254 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 C2CD2Q9Y426 696 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 INSL6Q9Y581 213 aa11.06□□□□□ -0.64
SYNE2-215ENST00000554997 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-215ENST00000554997 KCNJ18B7U540 433 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 GOLGA6L19H0YKK7 550 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 PTGESO14684 152 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 STX10O60499 249 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 PRKCSHP14314 528 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-215ENST00000554997 TNNI1P19237 187 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 CYP3A5P20815 502 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 GTF2H1P32780 548 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 MLH1P40692 756 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 WNT7BP56706 349 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 TPM4P67936 248 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 DLG4P78352 724 aa11.05□□□□□ -0.64
SYNE2-215ENST00000554997 HTRA4P83105 476 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms