RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 B3GNT9Q6UX72 402 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 FERMT3Q86UX7 667 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 NPAS3Q8IXF0 933 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 CELF5Q8N6W0 485 aaKnown RBP14.69□□□□□ -0.06
TUBB3-207ENST00000554927 MCRS1Q96EZ8 462 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 CLSTN3Q9BQT9 956 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
TUBB3-207ENST00000554927 BRMS1Q9HCU9 246 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 HCFC1R1Q9NWW0 138 aa14.69□□□□□ -0.06
TUBB3-207ENST00000554927 DDX25Q9UHL0 483 aaKnown RBP14.69□□□□□ -0.06
TUBB3-207ENST00000554927 RALYQ9UKM9 306 aaKnown RBP14.69□□□□□ -0.06
TUBB3-207ENST00000554927 MRPS23Q9Y3D9 190 aaKnown RBP14.69□□□□□ -0.06
TUBB3-207ENST00000554927 EML1O00423 815 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 RETP07949 1114 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 GCFC2P16383 781 aaKnown RBP14.68□□□□□ -0.06
TUBB3-207ENST00000554927 HOXA9P31269 272 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 SCRN1Q12765 414 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 PCBP1Q15365 356 aaKnown RBP eCLIP14.68□□□□□ -0.06
TUBB3-207ENST00000554927 INF2Q27J81 1249 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 AXDND1Q5T1B0 1012 aaPredicted RBP14.68□□□□□ -0.06
TUBB3-207ENST00000554927 ETNPPLQ8TBG4 499 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 FAM20AQ96MK3 541 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 AIFM3Q96NN9 605 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 KCNH3Q9ULD8 1083 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 TPCN1Q9ULQ1 816 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 KCNJ14Q9UNX9 436 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 PPME1Q9Y570 386 aa14.68□□□□□ -0.06
TUBB3-207ENST00000554927 STK36Q9NRP7 1315 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 CASTOR2A6NHX0 329 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 MAN2B1O00754 1011 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 ECI2O75521 394 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 NPTXRO95502 500 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 TFDP1Q14186 410 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 SIM2Q14190 667 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 XKR9Q5GH70 373 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 OTUD6AQ7L8S5 288 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 NEK8Q86SG6 692 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 CDR2LQ86X02 465 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 LNX1Q8TBB1 728 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 PIK3R5Q8WYR1 880 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 MTRQ99707 1265 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 PLA2G2FQ9BZM2 168 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 SEMA4GQ9NTN9 838 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 DNMT3BQ9UBC3 853 aaKnown RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 ORC3Q9UBD5 711 aaPredicted RBP14.67□□□□□ -0.06
TUBB3-207ENST00000554927 ANGPTL2Q9UKU9 493 aa14.67□□□□□ -0.06
TUBB3-207ENST00000554927 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 M0R2N6 131 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 ADAM12O43184 909 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 LRP3O75074 770 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 KIF4AO95239 1232 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 BAG4O95429 457 aaKnown RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 P4HBP07237 508 aaKnown RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 ARF4P18085 180 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 PTENP60484 403 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 FZD5Q13467 585 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 TRIM29Q14134 588 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 MXD4Q14582 209 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 IL31Q6EBC2 164 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 PPP4R3AQ6IN85 833 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 PRR23CQ6ZRP0 262 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 GSTCDQ8NEC7 633 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 BRD9Q9H8M2 597 aa14.66□□□□□ -0.06
TUBB3-207ENST00000554927 WRAP73Q9P2S5 460 aaPredicted RBP14.66□□□□□ -0.06
TUBB3-207ENST00000554927 CFAP47Q6ZTR5 3102 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 B4GALT5O43286 388 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 GDF9O60383 454 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 CCNT1O60563 726 aaKnown RBP14.65□□□□□ -0.06
TUBB3-207ENST00000554927 OR1D2P34982 312 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 CCR3P51677 355 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 NEK4P51957 841 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 MBTD1Q05BQ5 628 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 TUSC3Q13454 348 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 GRM2Q14416 872 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 UVSSAQ2YD98 709 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 TANGO2Q6ICL3 276 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 SLC27A1Q6PCB7 646 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 PIK3AP1Q6ZUJ8 805 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 DDX1Q92499 740 aaKnown RBP14.65□□□□□ -0.06
TUBB3-207ENST00000554927 DNASE1L2Q92874 299 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 LXNQ9BS40 222 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 CHRDQ9H2X0 955 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 GDE1Q9NZC3 331 aa14.65□□□□□ -0.06
TUBB3-207ENST00000554927 TBX3O15119 743 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 SLC37A4O43826 429 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 RHOP08100 348 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 POU2F2P09086 479 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 TDGF1P13385 188 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 KRT2P35908 639 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 ELAVL2Q12926 359 aaKnown RBP14.64□□□□□ -0.07
TUBB3-207ENST00000554927 PPP2R5CQ13362 524 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 CSRP2Q16527 193 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 C4orf19Q8IY42 314 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
TUBB3-207ENST00000554927 FAM3CQ92520 227 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms