RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.21
RDH11-207ENST00000554731 SPECC1Q5M775 1068 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 PADI6Q6TGC4 694 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 NOSTRINQ8IVI9 506 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
RDH11-207ENST00000554731 ERMNQ8TAM6 284 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 SHDQ96IW2 340 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
RDH11-207ENST00000554731 ACKR2O00590 384 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 CCL16O15467 120 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
RDH11-207ENST00000554731 CYP11B2P19099 503 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 RPA1P27694 616 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 NAMPTP43490 491 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 ID4P47928 161 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 NTHL1P78549 312 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 NAB2Q15742 525 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 DCAF4L1Q3SXM0 396 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 PARM1Q6UWI2 310 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
RDH11-207ENST00000554731 MTSS1LQ765P7 747 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 ERMP1Q7Z2K6 904 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 CCDC113Q9H0I3 377 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
RDH11-207ENST00000554731 GDAQ9Y2T3 454 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
RDH11-207ENST00000554731 VPS13AQ96RL7 3174 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 ADAM12O43184 909 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 POU2F2P09086 479 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 NEK4P51957 841 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 EFNA5P52803 228 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 STARD6P59095 220 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 GPC5P78333 572 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 RAB33AQ14088 237 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 UVSSAQ2YD98 709 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 AXDND1Q5T1B0 1012 aaPredicted RBP13.75□□□□□ -0.21
RDH11-207ENST00000554731 EEF1DP3Q658K8 133 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 ZC3H14Q6PJT7 736 aaKnown RBP13.75□□□□□ -0.21
RDH11-207ENST00000554731 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
RDH11-207ENST00000554731 C1orf210Q8IVY1 113 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 FGF13Q92913 245 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 FGF14Q92915 247 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 IFT74Q96LB3 600 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 RPP25Q9BUL9 199 aaKnown RBP13.75□□□□□ -0.21
RDH11-207ENST00000554731 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 USP20Q9Y2K6 914 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 R4GN57 208 aa13.75□□□□□ -0.21
RDH11-207ENST00000554731 TMEM189-UBE2V1I3L0A0 370 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 B3GAT3O94766 335 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 OR52Z1P0C646 297 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 MUTP22033 750 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 FGFR3P22607 806 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 OR1D2P34982 312 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
RDH11-207ENST00000554731 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
RDH11-207ENST00000554731 ZNF174Q15697 407 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 RTL10Q7L3V2 364 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
RDH11-207ENST00000554731 DMDP11532 3685 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 EDN1P05305 212 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 SP9P0CG40 484 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
RDH11-207ENST00000554731 PABPC1LQ4VXU2 614 aaKnown RBP13.73□□□□□ -0.21
RDH11-207ENST00000554731 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 ATF7IP2Q5U623 682 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 ITFG1Q8TB96 612 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 C8orf76Q96K31 380 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 UROC1Q96N76 676 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 PPP1R10Q96QC0 940 aaKnown RBP13.73□□□□□ -0.21
RDH11-207ENST00000554731 KIFC3Q9BVG8 833 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 OTOGLQ3ZCN5 2332 aa13.73□□□□□ -0.21
RDH11-207ENST00000554731 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 GLULP15104 373 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 CCT6AP40227 531 aaKnown RBP13.72□□□□□ -0.21
RDH11-207ENST00000554731 CLCNKBP51801 687 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 PFKPQ01813 784 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 PRKCQQ04759 706 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 MLF2Q15773 248 aaPredicted RBP13.72□□□□□ -0.21
RDH11-207ENST00000554731 SLC44A4Q53GD3 710 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 NT5DC1Q5TFE4 455 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 ANKS3Q6ZW76 656 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 NPAS3Q8IXF0 933 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 KXD1Q9BQD3 176 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 BCO2Q9BYV7 579 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 BHMT2Q9H2M3 363 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 FOXP1Q9H334 677 aaPredicted RBP13.72□□□□□ -0.21
RDH11-207ENST00000554731 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 HCFC1R1Q9NWW0 138 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms