RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 MAPK6Q16659 721 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 ASCL5Q7RTU5 278 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 PIK3R5Q8WYR1 880 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 KIFC3Q9BVG8 833 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 WNT16Q9UBV4 365 aa13.49□□□□□ -0.25
MTHFD1-207ENST00000554677 SF3B1O75533 1304 aaKnown RBP eCLIP13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 ARHGEF35A5YM69 484 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 ANHXE9PGG2 379 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.255e-6■■■□□ 14.9
MTHFD1-207ENST00000554677 TTC38Q5R3I4 469 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 FAM171A1Q5VUB5 890 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 ERICH6BQ5W0A0 696 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 SIX5Q8N196 739 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 DEPTORQ8TB45 409 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 STAMQ92783 540 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 NXPE3Q969Y0 559 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 TTPALQ9BTX7 342 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 FBXW11Q9UKB1 542 aa13.48□□□□□ -0.25
MTHFD1-207ENST00000554677 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 FRYLO94915 3013 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 ZNF292O60281 2723 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 CFHP08603 1231 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.251e-6■■■■■ 28.8
MTHFD1-207ENST00000554677 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 NTHL1P78549 312 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 CREMQ03060 361 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 PDIA5Q14554 519 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 IL17AQ16552 155 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 ELMSAN1Q6PJG2 1045 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 RSPO2Q6UXX9 243 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 CCDC105Q8IYK2 499 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 ST13P5Q8NFI4 369 aaPredicted RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 RTP3Q9BQQ7 232 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 RPP25Q9BUL9 199 aaKnown RBP13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 PIDD1Q9HB75 910 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 FBXL21Q9UKT6 434 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 KIAA1024Q9UPX6 916 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 F5P12259 2224 aa13.47□□□□□ -0.25
MTHFD1-207ENST00000554677 PRR23AA6NEV1 266 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 TMEM189-UBE2V1I3L0A0 370 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 SRFP11831 508 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 LIG1P18858 919 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 FGFR3P22607 806 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 TRAPPC10P48553 1259 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 PTGDRQ13258 359 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 HTR4Q13639 388 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 PPP2R5AQ15172 486 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 PSMD5Q16401 504 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 TAS1R3Q7RTX0 852 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 GRASPQ7Z6J2 395 aaPredicted RBP13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 DAW1Q8N136 415 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 IGSF22Q8N9C0 903 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 DTWD2Q8NBA8 298 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 ADPGKQ9BRR6 497 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 MIA3Q5JRA6 1907 aa13.46□□□□□ -0.25
MTHFD1-207ENST00000554677 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 EFNA5P52803 228 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 RAB33AQ14088 237 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 UPP1Q16831 310 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 DCAF4L1Q3SXM0 396 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 ATF7IP2Q5U623 682 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 GET4Q7L5D6 327 aaPredicted RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 FRMD5Q7Z6J6 570 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 CEP120Q8N960 986 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 C3orf58Q8NDZ4 430 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 GPR152Q8TDT2 470 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 IFT74Q96LB3 600 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 ACO2Q99798 780 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 GOLGA2P5Q9HBQ8 144 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 LRWD1Q9UFC0 647 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 CA14Q9ULX7 337 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 TNFSF13BQ9Y275 285 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 NUMBLQ9Y6R0 609 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 OTOGLQ3ZCN5 2332 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 DMXL1Q9Y485 3027 aa13.45□□□□□ -0.26
MTHFD1-207ENST00000554677 SMIM28A0A1B0GU29 152 aa13.44□□□□□ -0.26
MTHFD1-207ENST00000554677 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
MTHFD1-207ENST00000554677 E9PMD0 336 aa13.44□□□□□ -0.26
MTHFD1-207ENST00000554677 K7ERI5 159 aa13.44□□□□□ -0.26
MTHFD1-207ENST00000554677 ABLIM1O14639 778 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms