RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RAPGEFL1Q9UHV5 662 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 PFDN2Q9UHV9 154 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 AFG3L2Q9Y4W6 797 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 PCDHB4Q9Y5E5 795 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 X6R8D5 127 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 DOCK3Q8IZD9 2030 aa5.01□□□□□ -1.61
VTI1B-203ENST00000554636 MGAMO43451 1857 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 PDE4DIPQ5VU43 2346 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 BAZ2AQ9UIF9 1905 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 PDHXO00330 501 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 GOLIM4O00461 696 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 SMARCA5O60264 1052 aaPredicted RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 TLR2O60603 784 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 DGKIO75912 1065 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 CHGBP05060 677 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 IFIT2P09913 472 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 ATP5JP18859 108 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 ATP2B1P20020 1258 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 GTF2F1P35269 517 aaKnown RBP eCLIP5□□□□□ -1.61
VTI1B-203ENST00000554636 ADD2P35612 726 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 SOX10P56693 466 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 MAP4K2Q12851 820 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 TTF1Q15361 905 aaPredicted RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 C17orf99Q6UX52 265 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 SPATC1Q76KD6 591 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 ZC3H18Q86VM9 953 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 CERS3Q8IU89 383 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 CARFQ8N187 725 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 Q8N1Y9 231 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 ARRDC4Q8NCT1 418 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 PARK7Q99497 189 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 NOL10Q9BSC4 688 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 LRRCC1Q9C099 1032 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 DHX36Q9H2U1 1008 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 BOLA2Q9H3K6 86 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 DCTPP1Q9H773 170 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 SPATA6Q9NWH7 488 aaPredicted RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 SAP30BPQ9UHR5 308 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 HERC5Q9UII4 1024 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 PTPN22Q9Y2R2 807 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 ZHX2Q9Y6X8 837 aa5□□□□□ -1.61
VTI1B-203ENST00000554636 MKI67P46013 3256 aaKnown RBP5□□□□□ -1.61
VTI1B-203ENST00000554636 ZNF532Q9HCE3 1301 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 TRIM75PA6NK02 468 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 H7BY64 318 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 HGSO14964 777 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 FOXD2O60548 495 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 HLA-DOAP06340 250 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 PABPC1P11940 636 aaKnown RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 BUD31P41223 144 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 LACTBP83111 547 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 GABPAQ06546 454 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 SLC4A8Q2Y0W8 1093 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 TREML2Q5T2D2 321 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 TSHZ3Q63HK5 1081 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 NSMFQ6X4W1 530 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 GADL1Q6ZQY3 521 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 FASTKD5Q7L8L6 764 aaKnown RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 MIB1Q86YT6 1006 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 FOXP4Q8IVH2 680 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 FAM126BQ8IXS8 530 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 LCORLQ8N3X6 602 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 DDX1Q92499 740 aaKnown RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 ARMC5Q96C12 935 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 SGSM3Q96HU1 749 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 YTHDC1Q96MU7 727 aaKnown RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 KCNJ15Q99712 375 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 C11orf84Q9BUA3 381 aaPredicted RBP4.99□□□□□ -1.61
VTI1B-203ENST00000554636 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 ARHGAP39Q9C0H5 1083 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 EPB41L1Q9H4G0 881 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 PAG1Q9NWQ8 432 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 RTEL1Q9NZ71 1219 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 NTMQ9P121 344 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 MYOTQ9UBF9 498 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 CPA4Q9UI42 421 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 ZBTB21Q9ULJ3 1066 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 AGTPBP1Q9UPW5 1226 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 SLC45A1Q9Y2W3 748 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 NPFFR2Q9Y5X5 522 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 PTCH2Q9Y6C5 1203 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 MYH8P13535 1937 aa4.99□□□□□ -1.61
VTI1B-203ENST00000554636 SALL3Q9BXA9 1300 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 GREB1LQ9C091 1923 aaPredicted RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 TRAV20A0A0B4J274 112 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 TCRBV5S2A0A599 114 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SH3D21A4FU49 640 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 PRRG2O14669 202 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 PDPK1O15530 556 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 PRKAB2O43741 272 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 CAPNS1P04632 268 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ASNSP08243 561 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 CYP2D6P10635 497 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 GUCY1A2P33402 732 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SHMT1P34896 483 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 SARSP49591 514 aaKnown RBP4.98□□□□□ -1.61
VTI1B-203ENST00000554636 PLCD1P51178 756 aa4.98□□□□□ -1.61
VTI1B-203ENST00000554636 ITGA1P56199 1179 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms