RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 NACC1Q96RE7 527 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 FOXQ1Q9C009 403 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 PDZD7Q9H5P4 517 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 POLIQ9UNA4 740 aa26.74■■□□□ 1.87
FOXA1-204ENST00000554607 RECQL4O94761 1208 aa26.73■■□□□ 1.87
FOXA1-204ENST00000554607 SPATA31C1P0DKV0 1188 aa26.73■■□□□ 1.87
FOXA1-204ENST00000554607 NTHL1P78549 312 aa26.73■■□□□ 1.87
FOXA1-204ENST00000554607 PRKCQQ04759 706 aa26.73■■□□□ 1.87
FOXA1-204ENST00000554607 TRIM29Q14134 588 aa26.73■■□□□ 1.87
FOXA1-204ENST00000554607 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.73■■□□□ 1.87
FOXA1-204ENST00000554607 DIS3L2Q8IYB7 885 aaKnown RBP26.73■■□□□ 1.87
FOXA1-204ENST00000554607 ST13P5Q8NFI4 369 aaPredicted RBP26.73■■□□□ 1.87
FOXA1-204ENST00000554607 DOCK6Q96HP0 2047 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 KANSL1LA0AUZ9 987 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 POTEMA6NI47 508 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 CCL16O15467 120 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 PFKPQ01813 784 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 RAB33AQ14088 237 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 CATSPER3Q86XQ3 398 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 KIAA2013Q8IYS2 634 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 RUBCNQ92622 972 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 HINFPQ9BQA5 517 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 BCO2Q9BYV7 579 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 KCNH3Q9ULD8 1083 aa26.72■■□□□ 1.87
FOXA1-204ENST00000554607 ACKR2O00590 384 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 PRKCBP05771 671 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 GLULP15104 373 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 ANAPC15P60006 121 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 SNW1Q13573 536 aaKnown RBP26.71■■□□□ 1.87
FOXA1-204ENST00000554607 NAB2Q15742 525 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 MLF2Q15773 248 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-204ENST00000554607 SLC44A4Q53GD3 710 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 AXDND1Q5T1B0 1012 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-204ENST00000554607 RSPO2Q6UXX9 243 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-204ENST00000554607 NOSTRINQ8IVI9 506 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 DEPTORQ8TB45 409 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 SLC7A14Q8TBB6 771 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 POLR3CQ9BUI4 534 aaPredicted RBP26.71■■□□□ 1.87
FOXA1-204ENST00000554607 OSBPL6Q9BZF3 934 aa26.71■■□□□ 1.87
FOXA1-204ENST00000554607 RBM25P49756 843 aaKnown RBP26.7■■□□□ 1.86
FOXA1-204ENST00000554607 PPP2R5AQ15172 486 aa26.7■■□□□ 1.86
FOXA1-204ENST00000554607 NECAB1Q8N987 351 aa26.7■■□□□ 1.86
FOXA1-204ENST00000554607 GTF3C6Q969F1 213 aa26.7■■□□□ 1.86
FOXA1-204ENST00000554607 RMDN1Q96DB5 314 aa26.7■■□□□ 1.86
FOXA1-204ENST00000554607 DDX23Q9BUQ8 820 aaKnown RBP26.7■■□□□ 1.86
FOXA1-204ENST00000554607 CACNA1IQ9P0X4 2223 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 CACNA1AO00555 2505 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 TTLL13PA6NNM8 815 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 TMEM189-UBE2V1I3L0A0 370 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 WNT7AO00755 349 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 ADAM12O43184 909 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 KINO60870 393 aaKnown RBP26.69■■□□□ 1.86
FOXA1-204ENST00000554607 CYP11B2P19099 503 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 FGFR3P22607 806 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 OR1D2P34982 312 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 MAGEA9P43362 315 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 NAMPTP43490 491 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 ZNF528Q3MIS6 628 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 DCAF4L1Q3SXM0 396 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 PADI6Q6TGC4 694 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 ERMNQ8TAM6 284 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 ITFG1Q8TB96 612 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 TMEM60Q9H2L4 133 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 FBXO4Q9UKT5 387 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 MYH15Q9Y2K3 1946 aa26.69■■□□□ 1.86
FOXA1-204ENST00000554607 FANCMQ8IYD8 2048 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 ARHGEF35A5YM69 484 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 MED24O75448 989 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 ME3Q16798 604 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 PABPC1LQ4VXU2 614 aaKnown RBP26.68■■□□□ 1.86
FOXA1-204ENST00000554607 DGLUCYQ7Z3D6 616 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 APBB1IPQ7Z5R6 666 aaPredicted RBP26.68■■□□□ 1.86
FOXA1-204ENST00000554607 BSNDQ8WZ55 320 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 UROC1Q96N76 676 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 CCDC113Q9H0I3 377 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 SPATA6Q9NWH7 488 aaPredicted RBP26.68■■□□□ 1.86
FOXA1-204ENST00000554607 MTRRQ9UBK8 725 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 GDAQ9Y2T3 454 aa26.68■■□□□ 1.86
FOXA1-204ENST00000554607 LAMTOR5O43504 91 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 TRAPPC3O43617 180 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 LRRN2O75325 713 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 B3GAT3O94766 335 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 LIG1P18858 919 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 RPA1P27694 616 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 MCM7P33993 719 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 EFNA5P52803 228 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 PUM1Q14671 1186 aaKnown RBP eCLIP26.67■■□□□ 1.86
FOXA1-204ENST00000554607 UBXN2BQ14CS0 331 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 MAML2Q8IZL2 1156 aaPredicted RBP26.67■■□□□ 1.86
FOXA1-204ENST00000554607 NSUN7Q8NE18 718 aaKnown RBP26.67■■□□□ 1.86
FOXA1-204ENST00000554607 CXCL16Q9H2A7 254 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 DNMT3BQ9UBC3 853 aaKnown RBP26.67■■□□□ 1.86
FOXA1-204ENST00000554607 BACE2Q9Y5Z0 518 aa26.67■■□□□ 1.86
FOXA1-204ENST00000554607 FAM170BA6NMN3 283 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 ANKS3Q6ZW76 656 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 NPAS3Q8IXF0 933 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 IFT74Q96LB3 600 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 NELL2Q99435 816 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 KXD1Q9BQD3 176 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 MRPS23Q9Y3D9 190 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms