RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 AK8Q96MA6 479 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 CCDC113Q9H0I3 377 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 PDZD7Q9H5P4 517 aa13.62□□□□□ -0.23
SHMT2-214ENST00000554604 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
SHMT2-214ENST00000554604 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
SHMT2-214ENST00000554604 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-214ENST00000554604 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 MYO10Q9HD67 2058 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 TTLL13PA6NNM8 815 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 IKBKBO14920 756 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 POLR2DO15514 142 aaKnown RBP13.61□□□□□ -0.23
SHMT2-214ENST00000554604 ACTN4O43707 911 aaKnown RBP13.61□□□□□ -0.23
SHMT2-214ENST00000554604 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-214ENST00000554604 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
SHMT2-214ENST00000554604 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-214ENST00000554604 NPTX2P47972 431 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 GRIK3Q13003 919 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 PNOCQ13519 176 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 POSTNQ15063 836 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 DCAF4L1Q3SXM0 396 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 SPECC1Q5M775 1068 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 HYIQ5T013 277 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 ATF7IP2Q5U623 682 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 ANKRD54Q6NXT1 300 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 TMEM184AQ6ZMB5 413 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 C1orf186Q6ZWK4 172 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 CABP7Q86V35 215 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 TRIML1Q8N9V2 468 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 COLEC11Q9BWP8 271 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 EPHX3Q9H6B9 360 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 C17orf75Q9HAS0 396 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 MIOSQ9NXC5 875 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 SERTAD1Q9UHV2 236 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 IRAK3Q9Y616 596 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 TRIOO75962 3097 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
SHMT2-214ENST00000554604 URODP06132 367 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
SHMT2-214ENST00000554604 TPM4P67936 248 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 DSC1Q08554 894 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 KCNC3Q14003 757 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 DAW1Q8N136 415 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 AOPEPQ8N6M6 819 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 SYT2Q8N9I0 419 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-214ENST00000554604 KHSRPQ92945 711 aaKnown RBP eCLIP13.6□□□□□ -0.23
SHMT2-214ENST00000554604 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 EMILIN2Q9BXX0 1053 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 TRIM5Q9C035 493 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 MRPL17Q9NRX2 175 aaKnown RBP13.6□□□□□ -0.23
SHMT2-214ENST00000554604 SNTG2Q9NY99 539 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 KCNG1Q9UIX4 513 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 GDAQ9Y2T3 454 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
SHMT2-214ENST00000554604 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
SHMT2-214ENST00000554604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-214ENST00000554604 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SFI1A8K8P3 1242 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 C2CD2LO14523 706 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SLC26A4O43511 780 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 RECQL4O94761 1208 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SOD2P04179 222 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 EDN1P05305 212 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 THP07101 528 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SLFN14P0C7P3 912 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 PLA2G4BP0C869 781 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 ALADP13716 330 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 GUCY2CP25092 1073 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 KLRC2P26717 231 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SMTNP53814 917 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 CBX2Q14781 532 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-214ENST00000554604 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 CES5AQ6NT32 575 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 USP49Q70CQ1 688 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
SHMT2-214ENST00000554604 DZANK1Q9NVP4 752 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 KCND2Q9NZV8 630 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 SSX2IPQ9Y2D8 614 aa13.59□□□□□ -0.23
SHMT2-214ENST00000554604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.235e-7■■□□□ 13.5
SHMT2-214ENST00000554604 PI4K2BG5E9Z4 385 aa13.58□□□□□ -0.24
SHMT2-214ENST00000554604 BIN1O00499 593 aa13.58□□□□□ -0.24
SHMT2-214ENST00000554604 SLC16A4O15374 487 aa13.58□□□□□ -0.24
SHMT2-214ENST00000554604 SLC12A3P55017 1021 aa13.58□□□□□ -0.24
SHMT2-214ENST00000554604 STRN3Q13033 797 aa13.58□□□□□ -0.24
SHMT2-214ENST00000554604 MAPK7Q13164 816 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms