RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ZPBP2Q6X784 338 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 CASP10Q92851 521 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 MSLNLQ96KJ4 702 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 B3GALT6Q96L58 329 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 HERC2P3Q9BVR0 1158 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-213ENST00000554600 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
SHMT2-213ENST00000554600 MYMKA6NI61 221 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 CUTAO60888 179 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 PPP6R2O75170 966 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 EPCAMP16422 314 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 ZNF131P52739 623 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
SHMT2-213ENST00000554600 COASYQ13057 564 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 BECN1Q14457 450 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
SHMT2-213ENST00000554600 USP41Q3LFD5 358 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 TAS1R1Q7RTX1 841 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 SFR1Q86XK3 245 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 CEP57Q86XR8 500 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 GLYCTKQ8IVS8 523 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 GJD3Q8N144 294 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 SMRP1Q8NCR6 262 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 DDX12PQ92771 950 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 KLHL5Q96PQ7 755 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 PAAF1Q9BRP4 392 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 PTPRHQ9HD43 1115 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 TBC1D7Q9P0N9 293 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 CFAP45Q9UL16 551 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 TBX20Q9UMR3 447 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 SSX2IPQ9Y2D8 614 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 USP15Q9Y4E8 981 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-213ENST00000554600 IRAK3Q9Y616 596 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-213ENST00000554600 C5orf42Q9H799 3197 aa11.66□□□□□ -0.54
SHMT2-213ENST00000554600 XIRP2A4UGR9 3374 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SCN1AP35498 2009 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.545e-8■■■■■ 37.4
SHMT2-213ENST00000554600 A0A087X0B3 334 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 KIF4AO95239 1232 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 CNPP09543 421 aaKnown RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 HOXB8P17481 243 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 GAP43P17677 238 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SCP2P22307 547 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 PROZP22891 400 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 ABCD1P33897 745 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 ZC2HC1CQ53FD0 456 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 RARS2Q5T160 578 aaKnown RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 FAM171A1Q5VUB5 890 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 ATL3Q6DD88 541 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 PPFIBP1Q86W92 1011 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 RIN2Q8WYP3 895 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 STAMQ92783 540 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 DHX58Q96C10 678 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SNX27Q96L92 541 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 POP1Q99575 1024 aaKnown RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 MRPL44Q9H9J2 332 aaKnown RBP11.65□□□□□ -0.54
SHMT2-213ENST00000554600 GOLGA2P5Q9HBQ8 144 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 PRKAG3Q9UGI9 489 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 DENND4AQ7Z401 1863 aa11.65□□□□□ -0.54
SHMT2-213ENST00000554600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-213ENST00000554600 ABLIM1O14639 778 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 B3GAT3O94766 335 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 GCNT3O95395 438 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 ADH1AP07327 375 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 MYBP10242 640 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 CLCNKBP51801 687 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 DSG1Q02413 1049 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 MCL1Q07820 350 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 NAB2Q15742 525 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 HERC4Q5GLZ8 1057 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-213ENST00000554600 TMEM184AQ6ZMB5 413 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 ADHFE1Q8IWW8 467 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 C12orf76Q8N812 135 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-213ENST00000554600 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 UROC1Q96N76 676 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 MSTO1Q9BUK6 570 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 PANK4Q9NVE7 773 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 DOCK8Q8NF50 2099 aa11.64□□□□□ -0.55
SHMT2-213ENST00000554600 OGTO15294 1046 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 TEX28O15482 410 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 BRD1O95696 1058 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 CLTAP09496 248 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 WEE2P0C1S8 567 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 CXCL8P10145 99 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 RPL17P18621 184 aaKnown RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 GTF2BQ00403 316 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms