RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 RETREG1Q9H6L5 497 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 VEZTQ9HBM0 779 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 PUF60Q9UHX1 559 aaKnown RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 OAZ3Q9UMX2 235 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 TRAF6Q9Y4K3 522 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FER1L6Q2WGJ9 1857 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 GLTPD2A6NH11 291 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 MATN2O00339 956 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 KLF4O43474 513 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 KINO60870 393 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 RAB11FIP3O75154 756 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 RAD17O75943 681 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC175P0C221 793 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 FAM163BP0C2L3 166 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 NBPF7P0C2Y1 421 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 CR2P20023 1033 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 ACO1P21399 889 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 HMGB2P26583 209 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 TRPC1P48995 793 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 IFRD2Q12894 506 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 ATP2B3Q16720 1220 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 ZNF568Q3ZCX4 644 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 MFSD4BQ5TF39 518 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 MORC1Q86VD1 984 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 SUGP1Q8IWZ8 645 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 MYRIPQ8NFW9 859 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 TDRD7Q8NHU6 1098 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 SMCR8Q8TEV9 937 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 C17orf50Q8WW18 174 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 SYAP1Q96A49 352 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 RMDN2Q96LZ7 410 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 CEP89Q96ST8 783 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 MPHOSPH9Q99550 1183 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 SLX1AQ9BQ83 275 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 JRKLQ9Y4A0 524 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 ZNF831Q5JPB2 1677 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 TRPM7Q96QT4 1865 aa5.07□□□□□ -1.6
ATXN3-227ENST00000554491 AFDNP55196 1824 aaKnown RBP5.07□□□□□ -1.6
ATXN3-227ENST00000554491 PASKQ96RG2 1323 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 CFAP69A5D8W1 941 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 IQCA1LA6NCM1 817 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TIMM44O43615 452 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 HTATSF1O43719 755 aaKnown RBP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 CAND2O75155 1236 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 PTPN1P18031 435 aaKnown RBP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 DNAJA1P31689 397 aaKnown RBP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 GYS2P54840 703 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 RWDD2BP57060 319 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 DUSP8Q13202 625 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TMED1Q13445 227 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 PPP2R5AQ15172 486 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TERF2Q15554 542 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 PDCD2Q16342 344 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TBR1Q16650 682 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 BTBD8Q5XKL5 378 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 AP1ARQ63HQ0 302 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 ARHGAP36Q6ZRI8 547 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TRIM74Q86UV6 250 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 TEKT1Q969V4 418 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 ALG1Q9BT22 464 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 KIAA1683Q9H0B3 1180 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 CSRNP2Q9H175 543 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 RMI1Q9H9A7 625 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 GRPEL1Q9HAV7 217 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 RIC8BQ9NVN3 520 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 IRAK4Q9NWZ3 460 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 SWAP70Q9UH65 585 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 FBXO9Q9UK97 447 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.06□□□□□ -1.6
ATXN3-227ENST00000554491 CACNA1SQ13698 1873 aa5.06□□□□□ -1.6
ATXN3-227ENST00000554491 ROCK2O75116 1388 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 KTN1Q86UP2 1357 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 TRAV20A0A0B4J274 112 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 A0A1B0GUL7 405 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 MAN2B1O00754 1011 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 NARSO43776 548 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 CDC14BO60729 498 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 CUTAO60888 179 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 CDKL5O76039 1030 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 TPPPO94811 219 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 ZNF202O95125 648 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 BAG4O95429 457 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 KCNA2P16389 499 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 MAP2K2P36507 400 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 INHBEP58166 350 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 IL13RA1P78552 427 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 WDR72Q3MJ13 1102 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 C4orf46Q504U0 113 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 DALRD3Q5D0E6 543 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 MUM1L1Q5H9M0 696 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 SOGA3Q5TF21 947 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 LARP4Q71RC2 724 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 FILIP1Q7Z7B0 1213 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 PTRH1Q86Y79 214 aaKnown RBP5.05□□□□□ -1.6
ATXN3-227ENST00000554491 ANKRD20A12PQ8NF67 263 aa5.05□□□□□ -1.6
ATXN3-227ENST00000554491 DRC1Q96MC2 740 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms