RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CNMDO75829 334 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 PAPLNO95428 1278 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 CYP2C8P10632 490 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 VAV1P15498 845 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 BMP8BP34820 402 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 TM4SF4P48230 202 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 HERVK_113P62684 666 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 TEKQ02763 1124 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 NOGQ13253 232 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 GRM1Q13255 1194 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 PABPC4Q13310 644 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCFD1-212ENST00000554486 TMEM132BQ14DG7 1078 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 NPY5RQ15761 445 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 OTUD7BQ6GQQ9 843 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 CCDC174Q6PII3 467 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 CREG2Q8IUH2 290 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 TRIM59Q8IWR1 403 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 FAM184AQ8NB25 1140 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 WASF1Q92558 559 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 COA7Q96BR5 231 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 SLC12A9Q9BXP2 914 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 FOXP3Q9BZS1 431 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 CARS2Q9HA77 564 aaKnown RBP7.2□□□□□ -1.26
SCFD1-212ENST00000554486 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
SCFD1-212ENST00000554486 TXNRD2Q9NNW7 524 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 BARHL2Q9NY43 387 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 VPS54Q9P1Q0 977 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 BTBD7Q9P203 1132 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 SEC63Q9UGP8 760 aaKnown RBP7.2□□□□□ -1.26
SCFD1-212ENST00000554486 EBF1Q9UH73 591 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 AKT3Q9Y243 479 aa7.2□□□□□ -1.26
SCFD1-212ENST00000554486 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
SCFD1-212ENST00000554486 DOCK3Q8IZD9 2030 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ATP2A1O14983 1001 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ADAMTS3O15072 1205 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZBED4O75132 1171 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZNF205O95201 554 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ICAM1P05362 532 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 GSNP06396 782 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 HSPA6P17066 643 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 SYT1P21579 422 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 AFMP43652 599 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 OAZ1P54368 228 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 INHBEP58166 350 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 C1QTNF8P60827 252 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 GUCY1B3Q02153 619 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 SREBF2Q12772 1141 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 PKP1Q13835 747 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 USH1GQ495M9 461 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 MTERF2Q49AM1 385 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 RTP2Q5QGT7 225 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 KRT40Q6A162 431 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZPBP2Q6X784 338 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 HEATR3Q7Z4Q2 680 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 CPXCR1Q8N123 301 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 MB21D1Q8N884 522 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 FBXO18Q8NFZ0 1043 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 CLEC4DQ8WXI8 215 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 C8orf76Q96K31 380 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 FCRL3Q96P31 734 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-212ENST00000554486 PHF20Q9BVI0 1012 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 AMNQ9BXJ7 453 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 RAVER2Q9HCJ3 691 aaKnown RBP7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZCCHC17Q9NP64 241 aaKnown RBP7.19□□□□□ -1.26
SCFD1-212ENST00000554486 PRDM7Q9NQW5 492 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 SH3GLB2Q9NR46 395 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ARHGEF4Q9NR80 690 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 KCNJ14Q9UNX9 436 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 MTMR6Q9Y217 621 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZDHHC9Q9Y397 364 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 KIF3AQ9Y496 699 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 PCDHA1Q9Y5I3 950 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ADGRA2Q96PE1 1338 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 THSD7BQ9C0I4 1608 aa7.19□□□□□ -1.26
SCFD1-212ENST00000554486 ZNFX1Q9P2E3 1918 aaKnown RBP7.19□□□□□ -1.26
SCFD1-212ENST00000554486 CEP350Q5VT06 3117 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 hCG_1984214I3L0E3 225 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 STX6O43752 255 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 SYPP08247 313 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 NAT2P11245 290 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 PDCP20941 246 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 NAPAP54920 295 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 PPP2R2AP63151 447 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 EGR3Q06889 387 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 SF1Q15637 639 aaKnown RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 MUM1L1Q5H9M0 696 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 FOXB2Q5VYV0 432 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 GTF2IRD2BQ6EKJ0 949 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 GTF2IRD2Q86UP8 949 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 FAM177A1Q8N128 213 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 ZNF713Q8N859 430 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 BTN2A2Q8WVV5 523 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 FAM168AQ92567 244 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 SGSM3Q96HU1 749 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 PARK7Q99497 189 aaKnown RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 SPATA9Q9BWV2 254 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms