RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 DOCK3Q8IZD9 2030 aa17.12■□□□□ 0.33
TUBB3-206ENST00000554444 SRGAP2O75044 1071 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 SEC31AO94979 1220 aaKnown RBP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 TMOD1P28289 359 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 GABPB1Q06547 395 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 PRPF4BQ13523 1007 aaKnown RBP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 GRIK4Q16099 956 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 FAM187BQ17R55 369 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 ZACNQ401N2 412 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 CREG2Q8IUH2 290 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 KAT2BQ92831 832 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 RBAKQ9NYW8 714 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 F2P00734 622 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 KIF22Q14807 665 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 ARHGAP44Q17R89 818 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 SLC30A5Q8TAD4 765 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 CAGE1Q8TC20 777 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-206ENST00000554444 FNBP1Q96RU3 617 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 OSBPL9Q96SU4 736 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 RNF14Q9UBS8 474 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
TUBB3-206ENST00000554444 RRN3P2A6NIE6 340 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 CCDC172P0C7W6 258 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
TUBB3-206ENST00000554444 KIAA0753Q2KHM9 967 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-206ENST00000554444 CYP4F22Q6NT55 531 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 KIAA0319LQ8IZA0 1049 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 RUBCNQ92622 972 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 CAPZA3Q96KX2 299 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 KREMEN1Q96MU8 473 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 RHOXF2Q9BQY4 288 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 INO80BQ9C086 356 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-206ENST00000554444 PCNTO95613 3336 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 PTPRJQ12913 1337 aa17.1■□□□□ 0.33
TUBB3-206ENST00000554444 DDX3XO00571 662 aaKnown RBP eCLIP17.09■□□□□ 0.332e-8■■□□□ 13.3
TUBB3-206ENST00000554444 OGTO15294 1046 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 ALDH1A1P00352 501 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 AMHR2Q16671 573 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 ATF7IP2Q5U623 682 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 KAT5Q92993 513 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 CPSF3Q9UKF6 684 aaKnown RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 INTUQ9ULD6 942 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 A0A087WZ62 844 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 MAP2K7O14733 419 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 B4GALT5O43286 388 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 TNNI1P19237 187 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 PHKA2P46019 1235 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 VSNL1P62760 191 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 GRM1Q13255 1194 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 SEZ6Q53EL9 994 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 TDRD10Q5VZ19 366 aaKnown RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 ALKBH5Q6P6C2 394 aaKnown RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 BRSK2Q8IWQ3 736 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 FAM71AQ8IYT1 594 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 MMGT1Q8N4V1 131 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 LENG1Q96BZ8 264 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-206ENST00000554444 TLR10Q9BXR5 811 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 UBXN6Q9BZV1 441 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 AKT3Q9Y243 479 aa17.09■□□□□ 0.33
TUBB3-206ENST00000554444 HAS3O00219 553 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 PDE2AO00408 941 aaPredicted RBP17.08■□□□□ 0.33
TUBB3-206ENST00000554444 ZNF185O15231 689 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 SASH3O75995 380 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 TOMM70O94826 608 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 VTNP04004 478 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 TNFSF9P41273 254 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 MFAP3P55082 362 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 FAM193AP78312 1265 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 ZBTB33Q86T24 672 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 SHC3Q92529 594 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 TATDN2Q93075 761 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 FAM84AQ96KN4 292 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 CGRRF1Q99675 332 aa17.08■□□□□ 0.33
TUBB3-206ENST00000554444 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
TUBB3-206ENST00000554444 BUB1O43683 1085 aa17.08■□□□□ 0.32
TUBB3-206ENST00000554444 VNN1O95497 513 aa17.08■□□□□ 0.32
TUBB3-206ENST00000554444 PSMC4P43686 418 aa17.08■□□□□ 0.32
TUBB3-206ENST00000554444 ADAM17P78536 824 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms