RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 HAPLN2Q9GZV7 340 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 HIPK3Q9H422 1215 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 ASB7Q9H672 318 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 PLEKHA5Q9HAU0 1116 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 ERVK-5Q9HDB9 667 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TMEM39AQ9NV64 488 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 PADI3Q9ULW8 664 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 PMM2O15305 246 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 TNNC2P02585 160 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 TMEM191BP0C7N4 346 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 TNFSF9P41273 254 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 GCLMP48507 274 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 MXI1P50539 228 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 RAB27AP51159 221 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 MCCD1P59942 119 aaPredicted RBP11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 BIRC3Q13489 604 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 NT5DC4Q86YG4 428 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 WDR49Q8IV35 697 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 ZSWIM2Q8NEG5 633 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 DIS3LQ8TF46 1054 aaKnown RBP11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 PGBD4Q96DM1 585 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 ANKRD36BP1Q96IX9 119 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 CGRRF1Q99675 332 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 INTS13Q9NVM9 706 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 PARP2Q9UGN5 583 aa11.33□□□□□ -0.6
TMEM55B-205ENST00000554028 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 FAM189A1O60320 539 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CLSTN1O94985 981 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CLTBP09497 229 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 ITGA4P13612 1032 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 PBX1P40424 430 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 DLG4P78352 724 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CLDN10P78369 228 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 TFAMQ00059 246 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 FAAP100Q0VG06 881 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 ZBTB41Q5SVQ8 909 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CCDC186Q7Z3E2 898 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 SEPT8Q92599 483 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 APBB2Q92870 758 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 CRACR2AQ9BSW2 395 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 EIF2AQ9BY44 585 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 EDEM3Q9BZQ6 932 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 SNTG2Q9NY99 539 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 LUC7L2Q9Y383 392 aaKnown RBP11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
TMEM55B-205ENST00000554028 EVPLQ92817 2033 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 CXCL8P10145 99 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 TRPC3Q13507 836 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 CBWD6Q4V339 395 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 CBWD3Q5JTY5 395 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 CBWD5Q5RIA9 395 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 UBXN11Q5T124 520 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FMNL3Q8IVF7 1028 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 CEP120Q8N960 986 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FAM81BQ96LP2 452 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 ADAM2Q99965 735 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 IMPG2Q9BZV3 1241 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 C1orf112Q9NSG2 853 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FAM207AQ9NSI2 230 aaPredicted RBP11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 FAM105AQ9NUU6 356 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 ZNHIT6Q9NWK9 470 aaKnown RBP11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 RAB20Q9NX57 234 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 PRKAG2Q9UGJ0 569 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 SIK3Q9Y2K2 1263 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 DERAQ9Y315 318 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 IPPQ9Y573 584 aa11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
TMEM55B-205ENST00000554028 A0A0U1RQF3 1178 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 TTC26A0AVF1 554 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 ZNF623O75123 536 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms