RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 B3GALT6Q96L58 329 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 MFSD14AQ96MC6 490 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 UROC1Q96N76 676 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 ACAP3Q96P50 834 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 PAAF1Q9BRP4 392 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 TTPALQ9BTX7 342 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 CDT1Q9H211 546 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 PLEKHA4Q9H4M7 779 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
FOXN3-204ENST00000553840 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 C2orf16Q68DN1 1984 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 C2CD4DB7Z1M9 353 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 KIF4AO95239 1232 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 KRT18P05783 430 aaKnown RBP19.41■□□□□ 0.7
FOXN3-204ENST00000553840 SCP2P22307 547 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 OSTNP61366 133 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 NAB2Q15742 525 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 GLRA4Q5JXX5 417 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 FAM171A1Q5VUB5 890 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 DCLRE1AQ6PJP8 1040 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 TAS1R3Q7RTX0 852 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 CEP57Q86XR8 500 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 PALB2Q86YC2 1186 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 PTPRHQ9HD43 1115 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 CACNG4Q9UBN1 327 aa19.41■□□□□ 0.7
FOXN3-204ENST00000553840 TRAPPC3O43617 180 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 TOM1L1O75674 476 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 SYT1P21579 422 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.79e-7■■■□□ 17.4
FOXN3-204ENST00000553840 SIGLEC14Q08ET2 396 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
FOXN3-204ENST00000553840 ZPBP2Q6X784 338 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 OTOP3Q7RTS5 596 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 GPBP1Q86WP2 473 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 GLYCTKQ8IVS8 523 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 TMEM161BQ8NDZ6 487 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 FAM122AQ96E09 287 aa19.4■□□□□ 0.7
FOXN3-204ENST00000553840 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
FOXN3-204ENST00000553840 MYO10Q9HD67 2058 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 SMIM28A0A1B0GU29 152 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 CCDC195A0A1B0GUA6 201 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 TMEM221A6NGB7 291 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 TMEM189-UBE2V1I3L0A0 370 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 M0R296 226 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 B3GAT3O94766 335 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 FAM13AO94988 1023 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 BRD1O95696 1058 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 MAPTP10636 758 aaKnown RBP19.39■□□□□ 0.69
FOXN3-204ENST00000553840 HARSP12081 509 aaKnown RBP19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PROZP22891 400 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PSMD5Q16401 504 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 RTP2Q5QGT7 225 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PRSS55Q6UWB4 352 aaPredicted RBP19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.69
FOXN3-204ENST00000553840 HFE2Q6ZVN8 426 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 BMP8AQ7Z5Y6 402 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 ZDHHC14Q8IZN3 488 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PIK3R5Q8WYR1 880 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 STAMQ92783 540 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 PBXIP1Q96AQ6 731 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 BICD1Q96G01 975 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 DDX27Q96GQ7 796 aaKnown RBP19.39■□□□□ 0.69
FOXN3-204ENST00000553840 CXCL16Q9H2A7 254 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 ANKFY1Q9P2R3 1169 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 CCDC39Q9UFE4 941 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 SORCS3Q9UPU3 1222 aa19.39■□□□□ 0.69
FOXN3-204ENST00000553840 NPHP3-ACAD11A0A0J9YXS1 232 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CLDN3O15551 220 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 TGM5O43548 720 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 SPATA31D3P0C874 917 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 PLCG1P19174 1290 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 ABCD1P33897 745 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 TXLNAP40222 546 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CLCNKBP51801 687 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 NCKAP1LP55160 1127 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
FOXN3-204ENST00000553840 MTMR3Q13615 1198 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
FOXN3-204ENST00000553840 KARSQ15046 597 aaKnown RBP19.38■□□□□ 0.69
FOXN3-204ENST00000553840 ARSHQ5FYA8 562 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 SPATA31D4Q6ZUB0 917 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 HAUS6Q7Z4H7 955 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 UBALD2Q8IYN6 164 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CEP120Q8N960 986 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 LARP4BQ92615 738 aaKnown RBP19.38■□□□□ 0.69
FOXN3-204ENST00000553840 RAD54LQ92698 747 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 REEP2Q9BRK0 252 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 RHOBTB2Q9BYZ6 727 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CCSER1Q9C0I3 900 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 PIDD1Q9HB75 910 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 PARVGQ9HBI0 331 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 ZDHHC7Q9NXF8 308 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 CLIC4Q9Y696 253 aa19.38■□□□□ 0.69
FOXN3-204ENST00000553840 TBCAO75347 108 aaKnown RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 RPL17P18621 184 aaKnown RBP19.37■□□□□ 0.69
FOXN3-204ENST00000553840 PLA2G5P39877 138 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms