RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 CASTOR2A6NHX0 329 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 C2CD2LO14523 706 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 HNRNPDLO14979 420 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 LILRB3O75022 631 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 URODP06132 367 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 HARSP12081 509 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 NMT1P30419 496 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 LIG4P49917 911 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 GTF2BQ00403 316 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 DNM1Q05193 864 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 MCL1Q07820 350 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 GLRA4Q5JXX5 417 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 KIAA1841Q6NSI8 718 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 SHC4Q6S5L8 630 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 PPP1R10Q96QC0 940 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 EMILIN2Q9BXX0 1053 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 GPR62Q9BZJ7 368 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 TRIOO75962 3097 aa11.17□□□□□ -0.62
HNRNPC-208ENST00000553753 CNPP09543 421 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 HOXB8P17481 243 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ME1P48163 572 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 AXDND1Q5T1B0 1012 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ANKRD54Q6NXT1 300 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 FUT10Q6P4F1 479 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ZNF720Q7Z2F6 126 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 PPFIBP1Q86W92 1011 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 CASP10Q92851 521 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 HERC2P3Q9BVR0 1158 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ST6GALNAC4Q9H4F1 302 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SEL1LQ9UBV2 794 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 PRKAG3Q9UGI9 489 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SF3B1O75533 1304 aaKnown RBP eCLIP11.16□□□□□ -0.625e-6■■■■■ 59.2
HNRNPC-208ENST00000553753 KIF4AO95239 1232 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 PIGRP01833 764 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 IDEP14735 1019 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 GAP43P17677 238 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 KLRC2P26717 231 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 GLUD2P49448 558 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 DSG1Q02413 1049 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 BECN1Q14457 450 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 E2F4Q16254 413 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SEZ6Q53EL9 994 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SYCE2Q6PIF2 218 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SFR1Q86XK3 245 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 MAP4K3Q8IVH8 894 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 GJD3Q8N144 294 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 IQUBQ8NA54 791 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 HASPINQ8TF76 798 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SNX27Q96L92 541 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 ZMAT2Q96NC0 199 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 KLHL5Q96PQ7 755 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 TNMDQ9H2S6 317 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 MRPL44Q9H9J2 332 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 SLC38A7Q9NVC3 462 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 RCOR1Q9UKL0 485 aa11.16□□□□□ -0.62
HNRNPC-208ENST00000553753 CITO14578 2027 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 B3GAT3O94766 335 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 CLTAP09496 248 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 KCNE1P15382 129 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 CLCNKBP51801 687 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 KYAT1Q16773 422 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 UPP1Q16831 310 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 SLC10A6Q3KNW5 377 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 HERC4Q5GLZ8 1057 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 ADHFE1Q8IWW8 467 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 STAMQ92783 540 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 DHX58Q96C10 678 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 B3GALT6Q96L58 329 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 UROC1Q96N76 676 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 LRRC27Q9C0I9 530 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 CD320Q9NPF0 282 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 OLFML3Q9NRN5 406 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 KBTBD4Q9NVX7 518 aa11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 USP15Q9Y4E8 981 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-208ENST00000553753 A0A0B4J269 797 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 FRMD3A2A2Y4 597 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 TEX28O15482 410 aa11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 POLR2DO15514 142 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 MEFVO15553 781 aaPredicted RBP11.14□□□□□ -0.63
HNRNPC-208ENST00000553753 ADH1AP07327 375 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms