RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 Q6ZVL8 140 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 DNAJC10Q8IXB1 793 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 CMIPQ8IY22 773 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 LCORLQ8N3X6 602 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 REPS2Q8NFH8 660 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 SLC35B2Q8TB61 432 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 CRAMP1Q96RY5 1269 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 SENP6Q9GZR1 1112 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 TOR3AQ9H497 397 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 VTA1Q9NP79 307 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 CCM2LQ9NUG4 571 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 ATP11BQ9Y2G3 1177 aa5.5□□□□□ -1.53
SCFD1-210ENST00000553693 USP15Q9Y4E8 981 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-210ENST00000553693 FAM171A2A8MVW0 826 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 TEX33O43247 280 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 LPXNO60711 386 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 PRKD3O94806 890 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 SREBF1P36956 1147 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 MCAMP43121 646 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 CHN2P52757 468 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 RAP2BP61225 183 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 MGAT2Q10469 447 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 Q6YL49 198 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 RHOT2Q8IXI1 618 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 CPEB3Q8NE35 698 aaKnown RBP5.49□□□□□ -1.53
SCFD1-210ENST00000553693 SUPT20HQ8NEM7 779 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 HOXB13Q92826 284 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-210ENST00000553693 ANKFY1Q9P2R3 1169 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 MCM8Q9UJA3 840 aa5.49□□□□□ -1.53
SCFD1-210ENST00000553693 ATRNL1Q5VV63 1379 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 DRGXA6NNA5 263 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 MARCH11A6NNE9 402 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 ZNF185O15231 689 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 LMNAP02545 664 aaKnown RBP5.48□□□□□ -1.53
SCFD1-210ENST00000553693 RAP2AP10114 183 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 ATP5JP18859 108 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 PROZP22891 400 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 GUCY1A2P33402 732 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 ZEB1P37275 1124 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-210ENST00000553693 GPR3P46089 330 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 MTNR1BP49286 362 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 COL10A1Q03692 680 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 PPP3CAQ08209 521 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 AGAP9Q5VTM2 703 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 AFMIDQ63HM1 303 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 AMOTL1Q8IY63 956 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 BEND2Q8NDZ0 799 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 CASKIN2Q8WXE0 1202 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCFD1-210ENST00000553693 PHACTR3Q96KR7 559 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 MRI1Q9BV20 369 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 WDR11Q9BZH6 1224 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 DMRT3Q9NQL9 472 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 TMEM140Q9NV12 185 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 DKK2Q9UBU2 259 aa5.48□□□□□ -1.53
SCFD1-210ENST00000553693 K7ESF4 209 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 HKR1P10072 659 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 BMP5P22003 454 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 NOMO1Q15155 1222 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 SPDYE7PQ495Y7 208 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 ABHD17BQ5VST6 288 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 LHFPL2Q6ZUX7 228 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 FBXO18Q8NFZ0 1043 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 OR56A1Q8NGH5 318 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 SSH1Q8WYL5 1049 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 COQ10AQ96MF6 247 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 TEX101Q9BY14 249 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 RNPEPQ9H4A4 650 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 GPR45Q9Y5Y3 372 aa5.47□□□□□ -1.53
SCFD1-210ENST00000553693 POMCP01189 267 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 CFIP05156 583 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 OSMP13725 252 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 ADRA1BP35368 520 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 ERVK-21P61565 698 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 METRNLQ641Q3 311 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 OTUD7BQ6GQQ9 843 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 MED25Q71SY5 747 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 COG1Q8WTW3 980 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 NEU1Q99519 415 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 MANSC1Q9H8J5 431 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 KLHL11Q9NVR0 708 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 FAM30AQ9NZY2 134 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 RNF181Q9P0P0 153 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 AJAP1Q9UKB5 411 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-210ENST00000553693 COL4A3Q01955 1670 aa5.46□□□□□ -1.54
SCFD1-210ENST00000553693 PIPSLA2A3N6 862 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 UNC119BA6NIH7 251 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 GPR32O75388 356 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 CDKL5O76039 1030 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 NUDT3O95989 172 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 FOSP01100 380 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-210ENST00000553693 ALAS1P13196 640 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 GSPT1P15170 499 aaKnown RBP5.45□□□□□ -1.54
SCFD1-210ENST00000553693 ALDH1A3P47895 512 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 RESTQ13127 1097 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 KLF1Q13351 362 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-210ENST00000553693 NECAB2Q7Z6G3 386 aa5.45□□□□□ -1.54
SCFD1-210ENST00000553693 MAPKAPK5Q8IW41 473 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms