RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 GINM1Q9NU53 330 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 A0A087WZG4 1122 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 F8W031 263 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 SSX5O60225 188 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 FOXD2O60548 495 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 KRT19P08727 400 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 PSD4Q8NDX1 1056 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CEP19Q96LK0 163 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 PDGFDQ9GZP0 370 aaPredicted RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 VTI1BQ9UEU0 232 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 FAM32AQ9Y421 112 aaKnown RBP9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 RAD51BO15315 384 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 DAPK3O43293 454 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 S100A5P33763 92 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CCNG2Q16589 344 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC89Q8N998 374 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 EME1Q96AY2 570 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 KLHL32Q96NJ5 620 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 MYPNQ86TC9 1320 aa9.49□□□□□ -0.89
GTF2A1-203ENST00000553612 TMEM114B3SHH9 223 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 H0YJX3 145 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PTCD1O75127 700 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 BRAFP15056 766 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAN1A1P33908 653 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TAF1BQ53T94 588 aaPredicted RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ARID3BQ8IVW6 561 aaPredicted RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CCT6BQ92526 530 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PRAM1Q96QH2 718 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TRIM55Q9BYV6 548 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 DTNAQ9Y4J8 743 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TTC21BQ7Z4L5 1316 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF233A6NK53 670 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CD53P19397 219 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ALAS2P22557 587 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PGS1Q32NB8 556 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TRIM60Q495X7 471 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MCMDC2Q4G0Z9 681 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SNX19Q92543 992 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TMEM87BQ96K49 555 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 QPCTLQ9NXS2 382 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 KIF24Q5T7B8 1368 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 A0A0D9SFI3 127 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ATP6V1G2-DDX39BF2Z307 99 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 E2F3O00716 465 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 USP1O94782 785 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 FARP2O94887 1054 aaPredicted RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 RELAQ04206 551 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 RIPK1Q13546 671 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 DSC3Q14574 896 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PRR23BQ6ZRT6 265 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 OR7G1Q8NGA0 311 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 NRBF2Q96F24 287 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MYLK2Q9H1R3 596 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SERHL2Q9H4I8 314 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 C19orf44Q9H6X5 657 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAFFQ9ULX9 164 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAP3K2Q9Y2U5 619 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PCDHA13Q9Y5I0 950 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PALMO75781 387 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TOP3BO95985 862 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 IFNB1P01574 187 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAPK4P31152 587 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CAPZA2P47755 286 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ZNF132P52740 706 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PDK3Q15120 406 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAPK6Q16659 721 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MYLK3Q32MK0 819 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ARL13BQ3SXY8 428 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SLAIN1Q8ND83 568 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SH3KBP1Q96B97 665 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MTBPQ96DY7 904 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 KCND1Q9NSA2 647 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.48□□□□□ -0.894e-7■■■■■ 35.6
GTF2A1-203ENST00000553612 CYTH4Q9UIA0 394 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 HERC5Q9UII4 1024 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 EDARQ9UNE0 448 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SMIM31A0A1B0GVY4 71 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ETV3P41162 512 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 MAGEA4P43358 317 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SPRED3Q2MJR0 410 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 KRT40Q6A162 431 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 SLC4A11Q8NBS3 891 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CCDC120Q96HB5 630 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TMEM79Q9BSE2 394 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 EMILIN2Q9BXX0 1053 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 RXFP1Q9HBX9 757 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 POLR3BQ9NW08 1133 aaPredicted RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 ANKRD50Q9ULJ7 1429 aa9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 CFAP65Q6ZU64 1925 aaKnown RBP9.48□□□□□ -0.89
GTF2A1-203ENST00000553612 PTPRKQ15262 1439 aa9.47□□□□□ -0.89
GTF2A1-203ENST00000553612 C16orf96A6NNT2 1141 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms