RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MICAL1Q8TDZ2 1067 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 POMGNT1Q8WZA1 660 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 RABGGTAQ92696 567 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 ENTPD7Q9NQZ7 604 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 LZTS1Q9Y250 596 aa24.9■■□□□ 1.58
TDP1-206ENST00000553569 KLRC4O43908 158 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 NR1I2O75469 434 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 CLTAP09496 248 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 ERVFC1P60507 584 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 KMT5BQ4FZB7 885 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 PLPP4Q5VZY2 271 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 SLFN12LQ6IEE8 588 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 SLC39A2Q9NP94 309 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 MARCH5Q9NX47 278 aa24.89■■□□□ 1.58
TDP1-206ENST00000553569 PDCD11Q14690 1871 aaKnown RBP24.89■■□□□ 1.57
TDP1-206ENST00000553569 F8W810 466 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 EIF3DO15371 548 aaKnown RBP eCLIP24.88■■□□□ 1.57
TDP1-206ENST00000553569 MEFVO15553 781 aaPredicted RBP24.88■■□□□ 1.57
TDP1-206ENST00000553569 GADD45BO75293 160 aaPredicted RBP24.88■■□□□ 1.57
TDP1-206ENST00000553569 MYL1P05976 194 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 CA8P35219 290 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 FAM160A1Q05DH4 1040 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 PPP1R10Q96QC0 940 aaKnown RBP24.88■■□□□ 1.57
TDP1-206ENST00000553569 TCF25Q9BQ70 676 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 TMEM206Q9H813 350 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 PRDM6Q9NQX0 595 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 CNTN3Q9P232 1028 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 AGO2Q9UKV8 859 aaKnown RBP24.88■■□□□ 1.57
TDP1-206ENST00000553569 STYXL1Q9Y6J8 313 aa24.88■■□□□ 1.57
TDP1-206ENST00000553569 SMIM28A0A1B0GU29 152 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 FAM189A1O60320 539 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 RPN1P04843 607 aaKnown RBP24.87■■□□□ 1.57
TDP1-206ENST00000553569 NAB2Q15742 525 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 KYAT1Q16773 422 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 SLC10A6Q3KNW5 377 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 XKR4Q5GH76 650 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 ALKAL1Q6UXT8 129 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 EPM2AIP1Q7L775 607 aaPredicted RBP24.87■■□□□ 1.57
TDP1-206ENST00000553569 NELFCDQ8IXH7 590 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 VPS52Q8N1B4 723 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 CCDC34Q96HJ3 373 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 ZMAT2Q96NC0 199 aaKnown RBP24.87■■□□□ 1.57
TDP1-206ENST00000553569 PAAF1Q9BRP4 392 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 COLEC11Q9BWP8 271 aa24.87■■□□□ 1.57
TDP1-206ENST00000553569 RPF1Q9H9Y2 349 aaKnown RBP24.87■■□□□ 1.57
TDP1-206ENST00000553569 UBE4BO95155 1302 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 COL6A3P12111 3177 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 EYSQ5T1H1 3165 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 FSCN2O14926 492 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 ADSSP30520 456 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 ACOT2P49753 483 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 PPP2R3AQ06190 1150 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 DPYDQ12882 1025 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 SNW1Q13573 536 aaKnown RBP24.86■■□□□ 1.57
TDP1-206ENST00000553569 POSTNQ15063 836 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 ENOX2Q16206 610 aaKnown RBP24.86■■□□□ 1.57
TDP1-206ENST00000553569 TMC7Q7Z402 723 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 ADGRD2Q7Z7M1 963 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 DDX53Q86TM3 631 aaKnown RBP24.86■■□□□ 1.57
TDP1-206ENST00000553569 TMEM87AQ8NBN3 555 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 ENGASEQ8NFI3 743 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 FAM212AQ96EL1 285 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 VN1R3Q9BXE9 311 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 GOLGA2P5Q9HBQ8 144 aa24.86■■□□□ 1.57
TDP1-206ENST00000553569 KCNE1P15382 129 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 HOXD13P35453 343 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 SPAG1Q07617 926 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 HSP90AA2PQ14568 343 aaPredicted RBP24.85■■□□□ 1.57
TDP1-206ENST00000553569 KANK3Q6NY19 840 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 ARMCX5Q6P1M9 558 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 HASPINQ8TF76 798 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 NOC3LQ8WTT2 800 aaKnown RBP24.85■■□□□ 1.57
TDP1-206ENST00000553569 SCFD1Q8WVM8 642 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 CCDC47Q96A33 483 aaKnown RBP24.85■■□□□ 1.57
TDP1-206ENST00000553569 SAAL1Q96ER3 474 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 CBWD1Q9BRT8 395 aa24.85■■□□□ 1.57
TDP1-206ENST00000553569 CPSF3Q9UKF6 684 aaKnown RBP24.85■■□□□ 1.57
TDP1-206ENST00000553569 ANK1P16157 1881 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 SOX4Q06945 474 aaPredicted RBP24.84■■□□□ 1.57
TDP1-206ENST00000553569 PNOCQ13519 176 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 RBM23Q86U06 439 aaKnown RBP24.84■■□□□ 1.57
TDP1-206ENST00000553569 KIAA0895Q8NCT3 520 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 ZNF507Q8TCN5 953 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 AUTS2Q8WXX7 1259 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 PPP2R3CQ969Q6 453 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 C18orf25Q96B23 403 aaPredicted RBP24.84■■□□□ 1.57
TDP1-206ENST00000553569 ZBP1Q9H171 429 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 PCIF1Q9H4Z3 704 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 IGFLR1Q9H665 355 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 SLC38A7Q9NVC3 462 aa24.84■■□□□ 1.57
TDP1-206ENST00000553569 TTC26A0AVF1 554 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 LACTBL1A8MY62 500 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 TULP1O00294 542 aaPredicted RBP24.83■■□□□ 1.57
TDP1-206ENST00000553569 KIF4AO95239 1232 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 GARTP22102 1010 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 GTF2F1P35269 517 aaKnown RBP eCLIP24.83■■□□□ 1.57
TDP1-206ENST00000553569 HYAL1Q12794 435 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 STK4Q13043 487 aa24.83■■□□□ 1.57
TDP1-206ENST00000553569 SMC1AQ14683 1233 aaKnown RBP24.83■■□□□ 1.57
TDP1-206ENST00000553569 PDE12Q6L8Q7 609 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms