RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CEP57Q86XR8 500 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 RAD54LQ92698 747 aa20■□□□□ 0.79
SHMT2-206ENST00000553529 POP1Q99575 1024 aaKnown RBP20■□□□□ 0.79
SHMT2-206ENST00000553529 TADA2AO75478 443 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 ASGR2P07307 311 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 HOXB8P17481 243 aaPredicted RBP19.99■□□□□ 0.79
SHMT2-206ENST00000553529 TNFSF9P41273 254 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 GRM5P41594 1212 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 PKP1Q13835 747 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 GIT2Q14161 759 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
SHMT2-206ENST00000553529 FAM171A1Q5VUB5 890 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 RSPO2Q6UXX9 243 aaPredicted RBP19.99■□□□□ 0.79
SHMT2-206ENST00000553529 HFE2Q6ZVN8 426 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 EMILIN2Q9BXX0 1053 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 PANK2Q9BZ23 570 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 NT5C3AQ9H0P0 336 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 ZHX3Q9H4I2 956 aa19.99■□□□□ 0.79
SHMT2-206ENST00000553529 PDCD11Q14690 1871 aaKnown RBP19.99■□□□□ 0.79
SHMT2-206ENST00000553529 SMIM28A0A1B0GU29 152 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 TGM5O43548 720 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 NMT1P30419 496 aaKnown RBP19.98■□□□□ 0.79
SHMT2-206ENST00000553529 NCKAP1LP55160 1127 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 TPRNQ4KMQ1 711 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 KIAA1841Q6NSI8 718 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 SLC39A4Q6P5W5 647 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 MPZL3Q6UWV2 235 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 ALKAL1Q6UXT8 129 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 RASSF8Q8NHQ8 419 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 SPIRE2Q8WWL2 714 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 CHAMP1Q96JM3 812 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 SNX27Q96L92 541 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 AK8Q96MA6 479 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 FIZ1Q96SL8 496 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 NTPCRQ9BSD7 190 aaKnown RBP19.98■□□□□ 0.79
SHMT2-206ENST00000553529 RXFP1Q9HBX9 757 aa19.98■□□□□ 0.79
SHMT2-206ENST00000553529 ZMYM2Q9UBW7 1377 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 TECTAO75443 2155 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 SPDYE4A6NLX3 237 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 STX6O43752 255 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 N4BP1O75113 896 aaKnown RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 ALADP13716 330 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 LONP1P36776 959 aaKnown RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 GUCY2FP51841 1108 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 BMS1Q14692 1282 aaKnown RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 ZC2HC1CQ53FD0 456 aaPredicted RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 DYMQ7RTS9 669 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 HAUS6Q7Z4H7 955 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 LNX1Q8TBB1 728 aaPredicted RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 CALML4Q96GE6 196 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 INTS4Q96HW7 963 aaKnown RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 CLSTN3Q9BQT9 956 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 TCHPQ9BT92 498 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 TFIP11Q9UBB9 837 aaKnown RBP19.97■□□□□ 0.79
SHMT2-206ENST00000553529 TUBGCP4Q9UGJ1 667 aa19.97■□□□□ 0.79
SHMT2-206ENST00000553529 FSD2A1L4K1 749 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 K7ENM7 598 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 NR1I2O75469 434 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 PDGFBP01127 241 aaPredicted RBP19.96■□□□□ 0.79
SHMT2-206ENST00000553529 CXCL8P10145 99 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 TKTP29401 623 aaKnown RBP19.96■□□□□ 0.79
SHMT2-206ENST00000553529 ITIH3Q06033 890 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 SLC10A6Q3KNW5 377 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 USP41Q3LFD5 358 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 CES5AQ6NT32 575 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 GPR149Q86SP6 731 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 MYCT1Q8N699 235 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 ZNF707Q96C28 371 aaPredicted RBP19.96■□□□□ 0.79
SHMT2-206ENST00000553529 FGFBP2Q9BYJ0 223 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 SFXN1Q9H9B4 322 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 DZANK1Q9NVP4 752 aa19.96■□□□□ 0.79
SHMT2-206ENST00000553529 B3GAT3O94766 335 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 FAM13AO94988 1023 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 GLUD1P00367 558 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 ADH1AP07327 375 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 MCF2P10911 925 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 PDCP20941 246 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 ZXDAP98168 799 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 UPP1Q16831 310 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 XKR4Q5GH76 650 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 LARP4BQ92615 738 aaKnown RBP19.95■□□□□ 0.78
SHMT2-206ENST00000553529 STAMQ92783 540 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 CCDC94Q9BW85 323 aaPredicted RBP19.95■□□□□ 0.78
SHMT2-206ENST00000553529 CCSER1Q9C0I3 900 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 TBC1D7Q9P0N9 293 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 RBM19Q9Y4C8 960 aaKnown RBP19.95■□□□□ 0.78
SHMT2-206ENST00000553529 SF3B1O75533 1304 aaKnown RBP eCLIP19.95■□□□□ 0.785e-8■■■■■ 37.4
SHMT2-206ENST00000553529 CITO14578 2027 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 DOCK6Q96HP0 2047 aa19.95■□□□□ 0.78
SHMT2-206ENST00000553529 TRIOO75962 3097 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 CCDC195A0A1B0GUA6 201 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 MYMKA6NI61 221 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 PRR33A8MZF0 331 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 ANKRD63C9JTQ0 380 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 ZNF131P52739 623 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 NTHL1P78549 312 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 STRN3Q13033 797 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 NOLC1Q14978 699 aaKnown RBP eCLIP19.94■□□□□ 0.78
SHMT2-206ENST00000553529 PSMD5Q16401 504 aa19.94■□□□□ 0.78
SHMT2-206ENST00000553529 LILRA6Q6PI73 481 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms