RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RSPH1Q8WYR4 309 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 BORCS6Q96GS4 357 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 ACAP3Q96P50 834 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 FAM213AQ9BRX8 229 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 CCDC94Q9BW85 323 aaPredicted RBP16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 INSL6Q9Y581 213 aa16.17■□□□□ 0.18
MTHFD1-204ENST00000553405 SMIM28A0A1B0GU29 152 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 SOX1O00570 391 aaPredicted RBP16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 PSMA7O14818 248 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 TLL1O43897 1013 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 SCNN1GP51170 649 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 CYP2J2P51589 502 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 ZBTB6Q15916 424 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 ZNF280BQ86YH2 543 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 HACE1Q8IYU2 909 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 XXYLT1Q8NBI6 393 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 CLP1Q92989 425 aaKnown RBP16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 MFSD14AQ96MC6 490 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 PLEKHA5Q9HAU0 1116 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 PARP2Q9UGN5 583 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 CTNND2Q9UQB3 1225 aa16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 MRPL42Q9Y6G3 142 aaKnown RBP16.16■□□□□ 0.18
MTHFD1-204ENST00000553405 LINC01553A4QN01 128 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 LACTBL1A8MY62 500 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 AKAP3O75969 853 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 DDHD2O94830 711 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 LDHAP00338 332 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 NR2F2P24468 414 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 MATR3P43243 847 aaKnown RBP eCLIP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 TYRO3Q06418 890 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 SOX4Q06945 474 aaPredicted RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 PAK1Q13153 545 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 SNRNP35Q16560 246 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 ZSCAN23Q3MJ62 389 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 PAN2Q504Q3 1202 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 C11orf57Q6ZUT1 292 aaPredicted RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 TMEM130Q8N3G9 435 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 YME1L1Q96TA2 773 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 RWDD2AQ9UIY3 292 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 PTPRJQ12913 1337 aa16.15■□□□□ 0.18
MTHFD1-204ENST00000553405 MAPK13O15264 365 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 POMCP01189 267 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 CA3P07451 260 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 ERCC5P28715 1186 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 STX17P56962 302 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 TAP1Q03518 808 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 CYP24A1Q07973 514 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 GRIK3Q13003 919 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 STIM1Q13586 685 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 BTG3Q14201 252 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 GLRA4Q5JXX5 417 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 C1orf220Q5T0J3 134 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 EFCAB13Q8IY85 973 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 LRRC43Q8N309 656 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 CXorf38Q8TB03 319 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 EEF2KMTQ96G04 330 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 FAM84AQ96KN4 292 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 ZBED2Q9BTP6 218 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 NRDE2Q9H7Z3 1164 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 RPF1Q9H9Y2 349 aaKnown RBP16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 KIAA1586Q9HCI6 787 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 TOPORSQ9NS56 1045 aaPredicted RBP16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
MTHFD1-204ENST00000553405 SYCE3A1L190 88 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 EXOC3O60645 756 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 NFICP08651 508 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 IGFBP6P24592 240 aaPredicted RBP16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 DNAJB2P25686 324 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 CLDN10P78369 228 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 FKBP3Q00688 224 aaKnown RBP16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 ADAM9Q13443 819 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 PSMD6Q15008 389 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 RAB30Q15771 203 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 STX1AQ16623 288 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 CD300LGQ6UXG3 332 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 COLGALT2Q8IYK4 626 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 MRPL9Q9BYD2 267 aaKnown RBP16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 ASB7Q9H672 318 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 PDE11AQ9HCR9 933 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 ANO10Q9NW15 660 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 RBAKQ9NYW8 714 aaPredicted RBP16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 DNAJB4Q9UDY4 337 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 NLRC5Q86WI3 1866 aa16.13■□□□□ 0.17
MTHFD1-204ENST00000553405 ZNF233A6NK53 670 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 EFEMP2O95967 443 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 SPAG1Q07617 926 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 SCARA3Q6AZY7 606 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 JADE1Q6IE81 842 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 CD302Q8IX05 232 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms