RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KBTBD7Q8WVZ9 684 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 MRGPRX1Q96LB2 322 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 UHRF1Q96T88 793 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-208ENST00000553278 UNC45AQ9H3U1 944 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 JADE2Q9NQC1 790 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 ITM2CQ9NQX7 267 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 TPSG1Q9NRR2 321 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 ARHGAP20Q9P2F6 1191 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 SAE1Q9UBE0 346 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-208ENST00000553278 RBPJLQ9UBG7 517 aa6.82□□□□□ -1.32
SCFD1-208ENST00000553278 NUDT19A8MXV4 375 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 EIF3FO00303 357 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-208ENST00000553278 THAP12O43422 761 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 TIMM44O43615 452 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 LY86O95711 162 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 IL13RA1P78552 427 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 CD83Q01151 205 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 CD69Q07108 199 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 GALNT1Q10472 559 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-208ENST00000553278 FOXO1Q12778 655 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 G3BP1Q13283 466 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCFD1-208ENST00000553278 POSTNQ15063 836 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 MST1LQ2TV78 715 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 FLYWCH1Q4VC44 716 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 TIGD5Q53EQ6 642 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 C19orf54Q5BKX5 351 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 C3orf38Q5JPI3 329 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 GRAMD4Q6IC98 578 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 TMC5Q6UXY8 1006 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 COLGALT2Q8IYK4 626 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 PQLC1Q8N2U9 271 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 CCDC89Q8N998 374 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 IFI44Q8TCB0 444 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 NMD3Q96D46 503 aaKnown RBP6.81□□□□□ -1.32
SCFD1-208ENST00000553278 CNTD2Q9H8S5 307 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 BCO1Q9HAY6 547 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 OBP2BQ9NPH6 170 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 DLL4Q9NR61 685 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 STK32BQ9NY57 414 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 COL20A1Q9P218 1284 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 DNAI1Q9UI46 699 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 CRYL1Q9Y2S2 319 aa6.81□□□□□ -1.32
SCFD1-208ENST00000553278 MYBBP1AQ9BQG0 1328 aaKnown RBP6.8□□□□□ -1.32
SCFD1-208ENST00000553278 DYTNA2CJ06 578 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 SYT5O00445 386 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ANXA2P07355 339 aaKnown RBP6.8□□□□□ -1.32
SCFD1-208ENST00000553278 MAPKAPK2P49137 400 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ITGA8P53708 1063 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ANTXR2P58335 489 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ERVFC1P60507 584 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 TMEM62Q0P6H9 643 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 PDE1CQ14123 709 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-208ENST00000553278 RAB3GAP1Q15042 981 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 UBE3CQ15386 1083 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 MSMPQ1L6U9 139 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 CR1LQ2VPA4 569 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ABHD15Q6UXT9 468 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 RPTNQ6XPR3 784 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 Q6ZVL8 140 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 PPP1R3BQ86XI6 285 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 GALNT15Q8N3T1 639 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 MYLIPQ8WY64 445 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 ALG3Q92685 438 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 SHISA4Q96DD7 197 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 WDR92Q96MX6 357 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 HEPHQ9BQS7 1158 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 PDCD2LQ9BRP1 358 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 SORBS1Q9BX66 1292 aaKnown RBP6.8□□□□□ -1.32
SCFD1-208ENST00000553278 TRIM54Q9BYV2 358 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 RASSF1Q9NS23 344 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 TM7SF3Q9NS93 570 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 MAGEL2Q9UJ55 1249 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 PAXBP1Q9Y5B6 917 aa6.8□□□□□ -1.32
SCFD1-208ENST00000553278 NPC1O15118 1278 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 TBC1D4O60343 1298 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SNX2O60749 519 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 MBD4O95243 580 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 VEGFAP15692 232 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 DDCP20711 480 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 PRDX5P30044 214 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 TRHRP34981 398 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SERPINF1P36955 418 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 GDNFP39905 211 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 GLRBP48167 497 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 GALK1P51570 392 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 EIF5P55010 431 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 RPS16P62249 146 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 HTRA4P83105 476 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SLC44A4Q53GD3 710 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 RETSATQ6NUM9 610 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 FBXO38Q6PIJ6 1188 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SLC23A3Q6PIS1 610 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 ZNF783Q6ZMS7 281 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms