RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 LINC01465Q8N7H1 131 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 PIGKQ92643 395 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 RRP36Q96EU6 259 aaKnown RBP9.8□□□□□ -0.84
PRKCH-203ENST00000552875 CRELD1Q96HD1 420 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 CLSTN3Q9BQT9 956 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 TTPALQ9BTX7 342 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 KRT23Q9C075 422 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 GPR88Q9GZN0 384 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 AGO4Q9HCK5 861 aaKnown RBP9.8□□□□□ -0.84
PRKCH-203ENST00000552875 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 TICRRQ7Z2Z1 1910 aa9.8□□□□□ -0.84
PRKCH-203ENST00000552875 ASXL3Q9C0F0 2248 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 B4E1Z4 1266 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 ARNTLO00327 626 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 CCNE2O96020 404 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 PSAPP07602 524 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 ITGA4P13612 1032 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 DHPSP49366 369 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 AFF1P51825 1210 aaKnown RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 SPIRE1Q08AE8 756 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 GRSF1Q12849 480 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 ITGB3BPQ13352 177 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 CEP55Q53EZ4 464 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 CEP57Q86XR8 500 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 SMAP1Q8IYB5 467 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 HACE1Q8IYU2 909 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 ELMOD1Q8N336 334 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 EXOC4Q96A65 974 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 FCRL3Q96P31 734 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-203ENST00000552875 CORO1BQ9BR76 489 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 CNNM2Q9H8M5 875 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 TRPV4Q9HBA0 871 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 EBF1Q9UH73 591 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 DDX19BQ9UMR2 479 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 PCDHA6Q9UN73 950 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 PCDHA8Q9Y5H6 950 aa9.79□□□□□ -0.84
PRKCH-203ENST00000552875 A0A087WZ62 844 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 WDR27A2RRH5 827 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ARL5CA6NH57 179 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ENO4A6NNW6 628 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 HEPACAM2A8MVW5 462 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 DCLK1O15075 740 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 CYTH3O43739 400 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 FTH1P19P0C7X4 201 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ATP4AP20648 1035 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 HOXC13P31276 330 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ELF1P32519 619 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 SOX9P48436 509 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ELAVL2Q12926 359 aaKnown RBP9.78□□□□□ -0.84
PRKCH-203ENST00000552875 RAB33AQ14088 237 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 GRM4Q14833 912 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 RTP2Q5QGT7 225 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 IQCEQ6IPM2 695 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-203ENST00000552875 FAM181AQ8N9Y4 354 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ZSCAN18Q8TBC5 510 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-203ENST00000552875 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 TMEM209Q96SK2 561 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 FDXACB1Q9BRP7 624 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-203ENST00000552875 GTPBP2Q9BX10 602 aaKnown RBP9.78□□□□□ -0.84
PRKCH-203ENST00000552875 SLITRK6Q9H5Y7 841 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 PRORYQ9H606 182 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 ACACAQ13085 2346 aa9.78□□□□□ -0.84
PRKCH-203ENST00000552875 RRP8O43159 456 aaKnown RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 OR1D2P34982 312 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 ZNF76P36508 570 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 MLH1P40692 756 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 VIPR2P41587 438 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 CSRP3P50461 194 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 DGKEP52429 567 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 AMPD2Q01433 879 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 GFPT1Q06210 699 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 CYP4F3Q08477 520 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 FCHO2Q0JRZ9 810 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 SLC14A1Q13336 389 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 ARHGAP29Q52LW3 1261 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 TAF1BQ53T94 588 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 FAM171A1Q5VUB5 890 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 LMBRD2Q68DH5 695 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 ZNF746Q6NUN9 644 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 TXNDC11Q6PKC3 985 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 GPR155Q7Z3F1 870 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 RABEPKQ7Z6M1 372 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 SYT12Q8IV01 421 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 LEMD2Q8NC56 503 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 LNX1Q8TBB1 728 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 HHIPQ96QV1 700 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 GAD1Q99259 594 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 POLMQ9NP87 494 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-203ENST00000552875 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
PRKCH-203ENST00000552875 SPAG17Q6Q759 2223 aa9.76□□□□□ -0.85
PRKCH-203ENST00000552875 MTCL1Q9Y4B5 1905 aaKnown RBP9.76□□□□□ -0.85
PRKCH-203ENST00000552875 ERICH2A1L162 156 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms