RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ASB3Q9Y575 518 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 SLC16A3O15427 465 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 CAND2O75155 1236 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 GNAT1P11488 350 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 ALAS1P13196 640 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 RPL13P26373 211 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 NMT1P30419 496 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 POLR2FP61218 127 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 KLHL30Q0D2K2 578 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 SPP2Q13103 211 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 DHX34Q14147 1143 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 PCNX4Q63HM2 1172 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 ERICH1Q86X53 443 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 AGGF1Q8N302 714 aaeCLIP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 MDM1Q8TC05 714 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 LXNQ9BS40 222 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 NEUROG2Q9H2A3 272 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 SEL1LQ9UBV2 794 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 AGAP1Q9UPQ3 857 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
TUBA1C-209ENST00000552448 DCDC2CA8MYV0 355 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ZBED4O75132 1171 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 GNAZP19086 355 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 CALB2P22676 271 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 CASP4P49662 377 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 OAZ1P54368 228 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 KLC1Q07866 573 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 CUL3Q13618 768 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ACVR2BQ13705 512 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 LAMB3Q13751 1172 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ASIC2Q16515 512 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 GPR162Q16538 588 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 NFIL3Q16649 462 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ZC2HC1CQ53FD0 456 aaPredicted RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 MFSD5Q6N075 450 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ZNF720Q7Z2F6 126 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 LRRC57Q8N9N7 239 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 TEKT4Q8WW24 435 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 BORCS6Q96GS4 357 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 RUNDC3BQ96NL0 473 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 TMEM237Q96Q45 408 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 ADAM7Q9H2U9 754 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 RNPEPL1Q9HAU8 725 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 METTL14Q9HCE5 456 aaKnown RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 TMOD4Q9NZQ9 345 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 MYPNQ86TC9 1320 aa11.8□□□□□ -0.52
TUBA1C-209ENST00000552448 OTOFQ9HC10 1997 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DDX39AO00148 427 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 BACH1O14867 736 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 CLIC2O15247 247 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 HSPA6P17066 643 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PCK1P35558 622 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ABL2P42684 1182 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 IREB2P48200 963 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.524e-6■■■□□ 18.9
TUBA1C-209ENST00000552448 ENDOVQ8N8Q3 282 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 TAAR1Q96RJ0 339 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 PRMT1Q99873 361 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 FAM192AQ9GZU8 254 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 IKZF4Q9H2S9 585 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ABCF3Q9NUQ8 709 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 IRAK4Q9NWZ3 460 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ATP8A1Q9Y2Q0 1164 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 CSADQ9Y600 493 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 UBE4BO95155 1302 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 ARHGEF35A5YM69 484 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 GFPT2O94808 682 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 P4HBP07237 508 aaKnown RBP11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 KRT16P08779 473 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 SLC9A1P19634 815 aa11.79□□□□□ -0.52
TUBA1C-209ENST00000552448 EPHX2P34913 555 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms