RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 NRP1O14786 923 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 TRAK2O60296 914 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 CUTAO60888 179 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PPP6R2O75170 966 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 TADA2AO75478 443 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 DDHD2O94830 711 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 YEATS4O95619 227 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 CXCL14O95715 111 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 THP07101 528 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 GALTP07902 379 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 IDEP14735 1019 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 DNAJB1P25685 340 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ABCD1P33897 745 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 IRS1P35568 1242 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ME1P48163 572 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 LIG4P49917 911 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ERVFC1P60507 584 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 OSTNP61366 133 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 AMPD3Q01432 767 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 GRIK3Q13003 919 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 GIT2Q14161 759 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ATL3Q6DD88 541 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 KIAA1841Q6NSI8 718 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 NYAP1Q6ZVC0 841 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 HAUS6Q7Z4H7 955 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 SCUBE3Q8IX30 993 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 FAM178BQ8IXR5 827 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 SLC39A11Q8N1S5 342 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PDILTQ8N807 584 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 LINC00301Q8NCQ3 95 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 KCNG4Q8TDN1 519 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ZNF516Q92618 1163 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 IGSF21Q96ID5 467 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PCMTD1Q96MG8 357 aaPredicted RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ACO2Q99798 780 aaKnown RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 REEP2Q9BRK0 252 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 LRRC27Q9C0I9 530 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PDZD7Q9H5P4 517 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PARVGQ9HBI0 331 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 TOPORSQ9NS56 1045 aaPredicted RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ANKFY1Q9P2R3 1169 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 DNAJB4Q9UDY4 337 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 SSX2IPQ9Y2D8 614 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 USP20Q9Y2K6 914 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PRG3Q9Y2Y8 225 aaPredicted RBP6.47□□□□□ -1.37
CCDC65-204ENST00000552188 ANK1P16157 1881 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PLXNA3P51805 1871 aa6.47□□□□□ -1.37
CCDC65-204ENST00000552188 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 H3BQ06 376 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 PER2O15055 1255 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 SPTLC1O15269 473 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 CLDN3O15551 220 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 RECQL4O94761 1208 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 URODP06132 367 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 LINC00271P0C7V0 271 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MCF2P10911 925 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 GAP43P17677 238 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 SCP2P22307 547 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 SLC11A1P49279 550 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 KRT85P78386 507 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 HYAL1Q12794 435 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MAPK7Q13164 816 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 CLUL1Q15846 466 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ARSHQ5FYA8 562 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 NT5DC1Q5TFE4 455 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 EEF1DP3Q658K8 133 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 PTCRAQ6ISU1 281 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 LLGL2Q6P1M3 1020 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MPZL3Q6UWV2 235 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ZPBP2Q6X784 338 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 USP49Q70CQ1 688 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ADGRD2Q7Z7M1 963 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 DDX53Q86TM3 631 aaKnown RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ZNF280BQ86YH2 543 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 CCDC65Q8IXS2 484 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 DAW1Q8N136 415 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 VPS52Q8N1B4 723 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 SPATA32Q96LK8 384 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ZFP42Q96MM3 310 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ACAP3Q96P50 834 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 UHRF1Q96T88 793 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 CDCA3Q99618 268 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 TARS2Q9BW92 718 aaKnown RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 COL25A1Q9BXS0 654 aaPredicted RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 EMILIN2Q9BXX0 1053 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MRPL44Q9H9J2 332 aaKnown RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MRPL17Q9NRX2 175 aaKnown RBP6.46□□□□□ -1.38
CCDC65-204ENST00000552188 BLOC1S4Q9NUP1 217 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 MIOSQ9NXC5 875 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 TNFSF13BQ9Y275 285 aa6.46□□□□□ -1.38
CCDC65-204ENST00000552188 ZMYM2Q9UBW7 1377 aa6.45□□□□□ -1.38
CCDC65-204ENST00000552188 C2CD2LO14523 706 aa6.45□□□□□ -1.38
CCDC65-204ENST00000552188 HNRNPDLO14979 420 aaKnown RBP6.45□□□□□ -1.38
CCDC65-204ENST00000552188 LINC01565O15544 149 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms