RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 DNAJB4Q9UDY4 337 aa6.08□□□□□ -1.44
HOXB3-213ENST00000552000 GMEB2Q9UKD1 530 aa6.08□□□□□ -1.44
HOXB3-213ENST00000552000 FBXO4Q9UKT5 387 aa6.08□□□□□ -1.44
HOXB3-213ENST00000552000 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 KANSL1LA0AUZ9 987 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 FAM170BA6NMN3 283 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 MEIS3P2A8K0S8 358 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ANHXE9PGG2 379 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SLC30A4O14863 429 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 GLUD1P00367 558 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SPATA31D3P0C874 917 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 LAMP2P13473 410 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ITGB7P26010 798 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 PHKA2P46019 1235 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 GPC3P51654 580 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 AK2P54819 239 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 STARD6P59095 220 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 GPC5P78333 572 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 DMWDQ09019 674 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SPEM2Q0P670 501 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 CLN3Q13286 438 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SNW1Q13573 536 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SART3Q15020 963 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 MLF2Q15773 248 aaPredicted RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 CEP55Q53EZ4 464 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 NOMO2Q5JPE7 1267 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 EFCAB12Q6NXP0 572 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 MIS18BP1Q6P0N0 1132 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 TSSK4Q6SA08 328 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 GLB1LQ6UWU2 654 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SPATA31D4Q6ZUB0 917 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ZNF280BQ86YH2 543 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 PGBD3Q8N328 593 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 CCDC82Q8N4S0 544 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 SRBD1Q8N5C6 995 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 LINC01465Q8N7H1 131 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ZBTB44Q8NCP5 570 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 CTCFLQ8NI51 663 aaPredicted RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ZNF707Q96C28 371 aaPredicted RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 LNPKQ9C0E8 428 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 PIDD1Q9HB75 910 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 MRPL17Q9NRX2 175 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 DACT1Q9NYF0 836 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 MTF2Q9Y483 593 aaPredicted RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 TAF6LQ9Y6J9 622 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 URB1O60287 2271 aaKnown RBP6.07□□□□□ -1.44
HOXB3-213ENST00000552000 ABCA7Q8IZY2 2146 aa6.07□□□□□ -1.44
HOXB3-213ENST00000552000 UNC79Q9P2D8 2635 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TDRD15B5MCY1 1934 aaKnown RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 GREB1Q4ZG55 1949 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 CARNS1A5YM72 827 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 MEIS1O00470 390 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 MAGEB2O15479 319 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TEX28O15482 410 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TBC1D4O60343 1298 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 LILRB5O75023 590 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 AP1G2O75843 785 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 URODP06132 367 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RXRAP19793 462 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 CD72P21854 359 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TMOD1P28289 359 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 ZNF76P36508 570 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 GATA4P43694 442 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 ANTXR2P58335 489 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 SLC44A4Q53GD3 710 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TWF2Q6IBS0 349 aaKnown RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 ELMSAN1Q6PJG2 1045 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 CYP26C1Q6V0L0 522 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TAS1R1Q7RTX1 841 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 PLA2G4DQ86XP0 818 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RAB11FIP4Q86YS3 637 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 ZNF654Q8IZM8 581 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 NETO1Q8TDF5 533 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 FGF14Q92915 247 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 BORCS6Q96GS4 357 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RPS6KC1Q96S38 1066 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 LZTS2Q9BRK4 669 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 DDX23Q9BUQ8 820 aaKnown RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 TRAIPQ9BWF2 469 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 ANO3Q9BYT9 981 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RHOBTB2Q9BYZ6 727 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 FAM117AQ9C073 453 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 IL25Q9H293 177 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 LTB4R2Q9NPC1 389 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 SH2B1Q9NRF2 756 aaPredicted RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.06□□□□□ -1.441e-7■□□□□ 10.1
HOXB3-213ENST00000552000 ANGPTL2Q9UKU9 493 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 RAB23Q9ULC3 237 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 PRG3Q9Y2Y8 225 aaPredicted RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 MAFBQ9Y5Q3 323 aaPredicted RBP6.06□□□□□ -1.44
HOXB3-213ENST00000552000 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
HOXB3-213ENST00000552000 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
HOXB3-213ENST00000552000 E7EWF7 191 aa6.05□□□□□ -1.44
HOXB3-213ENST00000552000 HIP1O00291 1037 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms