RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TEX33O43247 280 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 RAP2AP10114 183 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 AGXTP21549 392 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 ZFP36P26651 326 aaKnown RBP6.33□□□□□ -1.4
GPN3-209ENST00000551079 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 BMPR1AP36894 532 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 CRB2Q5IJ48 1285 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.33□□□□□ -1.4
GPN3-209ENST00000551079 FBXO18Q8NFZ0 1043 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.33□□□□□ -1.4
GPN3-209ENST00000551079 CASKIN2Q8WXE0 1202 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 ZNF277Q9NRM2 450 aaPredicted RBP6.33□□□□□ -1.4
GPN3-209ENST00000551079 TMEM140Q9NV12 185 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 DNM3Q9UQ16 869 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 USP15Q9Y4E8 981 aaPredicted RBP6.33□□□□□ -1.4
GPN3-209ENST00000551079 DMRT1Q9Y5R6 373 aa6.33□□□□□ -1.4
GPN3-209ENST00000551079 CADPSQ9ULU8 1353 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 SBNO2Q9Y2G9 1366 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 ZNF185O15231 689 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 NDUFA10O95299 355 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 ATP5JP18859 108 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 RAP2BP61225 183 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 BEAN1Q3B7T3 259 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
GPN3-209ENST00000551079 PHACTR3Q96KR7 559 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 REXO4Q9GZR2 422 aaKnown RBP6.32□□□□□ -1.4
GPN3-209ENST00000551079 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
GPN3-209ENST00000551079 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
GPN3-209ENST00000551079 CENPVL1A0A0U1RR11 272 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 B3GALT2O43825 422 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 CHN2P52757 468 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 INHBEP58166 350 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 MXRA7P84157 204 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 FSTL1Q12841 308 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 SEPT2Q15019 361 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 CLUL1Q15846 466 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 SMN1Q16637 294 aaKnown RBP6.31□□□□□ -1.4
GPN3-209ENST00000551079 AGAP9Q5VTM2 703 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 OTUD7BQ6GQQ9 843 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 PCSK4Q6UW60 755 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 VRK3Q8IV63 474 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 ARHGEF19Q8IW93 802 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 RHOT2Q8IXI1 618 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 STON2Q8WXE9 905 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 SLC2A13Q96QE2 648 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 MANSC1Q9H8J5 431 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 FPGT-TNNI3KV9GXZ4 949 aa6.31□□□□□ -1.4
GPN3-209ENST00000551079 POLR2AP24928 1970 aaKnown RBP6.31□□□□□ -1.4
GPN3-209ENST00000551079 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 LPXNO60711 386 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 POMCP01189 267 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 GCP02774 474 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 ALDH1A3P47895 512 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 TAP1Q03518 808 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 ARMC6Q6NXE6 501 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 PGM2L1Q6PCE3 622 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 MED25Q71SY5 747 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
GPN3-209ENST00000551079 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 TEX101Q9BY14 249 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 LDAHQ9H6V9 325 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 CYP4F11Q9HBI6 524 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 SIK3Q9Y2K2 1263 aa6.3□□□□□ -1.4
GPN3-209ENST00000551079 WNT10BO00744 389 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 GPR32O75388 356 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 DDX6P26196 483 aaKnown RBP eCLIP6.29□□□□□ -1.4
GPN3-209ENST00000551079 SLC6A9P48067 706 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 FUBP3Q96I24 572 aaKnown RBP eCLIP6.29□□□□□ -1.4
GPN3-209ENST00000551079 AGAP2Q99490 1192 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 NEU1Q99519 415 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 SERHL2Q9H4I8 314 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 SAP30BPQ9UHR5 308 aaKnown RBP6.29□□□□□ -1.4
GPN3-209ENST00000551079 PACSIN3Q9UKS6 424 aa6.29□□□□□ -1.4
GPN3-209ENST00000551079 GRID2IPA4D2P6 1211 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 CFIP05156 583 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 FPR1P21462 350 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 ZEB1P37275 1124 aaPredicted RBP6.28□□□□□ -1.4
GPN3-209ENST00000551079 GUCY2FP51841 1108 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 USP14P54578 494 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 UBXN2BQ14CS0 331 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 TSHZ3Q63HK5 1081 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 SEM1Q6ZVN7 128 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 PPM1NQ8N819 430 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
GPN3-209ENST00000551079 OR56A1Q8NGH5 318 aa6.28□□□□□ -1.4
GPN3-209ENST00000551079 OR2I1PQ8NGU4 316 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms