RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 PLEKHG2Q9H7P9 1386 aa6.51□□□□□ -1.37
CPSF6-206ENST00000550987 C1orf167Q5SNV9 1468 aa6.51□□□□□ -1.37
CPSF6-206ENST00000550987 CHD8Q9HCK8 2581 aa6.51□□□□□ -1.37
CPSF6-206ENST00000550987 SPAG9O60271 1321 aaKnown RBP6.5□□□□□ -1.37
CPSF6-206ENST00000550987 SBF2Q86WG5 1849 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 AKR1B10O60218 316 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 SPINK2P20155 84 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 SERPINB3P29508 390 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 WASP42768 502 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 CD97P48960 835 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 ZNF200P98182 395 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-206ENST00000550987 WDR72Q3MJ13 1102 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 TOGARAM2Q6ZUX3 1019 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 BMP8AQ7Z5Y6 402 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 KAT5Q92993 513 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 DYDC2Q96IM9 177 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 CDK5RAP3Q96JB5 506 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 TMEM209Q96SK2 561 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 TACO1Q9BSH4 297 aaKnown RBP6.5□□□□□ -1.37
CPSF6-206ENST00000550987 PITHD1Q9GZP4 211 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-206ENST00000550987 BHMT2Q9H2M3 363 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 DLL4Q9NR61 685 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 LRRIQ1Q96JM4 1722 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 FMN2Q9NZ56 1722 aa6.5□□□□□ -1.37
CPSF6-206ENST00000550987 FYCO1Q9BQS8 1478 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 RANBP2P49792 3224 aaKnown RBP6.49□□□□□ -1.37
CPSF6-206ENST00000550987 FAM171A2A8MVW0 826 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 IGHA1P01876 353 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 SETSIPP0DME0 302 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 NCAM1P13591 858 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 ZKSCAN1P17029 563 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-206ENST00000550987 PEX2P28328 305 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 CD83Q01151 205 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 STK3Q13188 491 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
CPSF6-206ENST00000550987 MAN2A1Q16706 1144 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 C4orf46Q504U0 113 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 PHF19Q5T6S3 580 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 OTOP2Q7RTS6 562 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 PROSER1Q86XN7 944 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 FAM129CQ86XR2 697 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 KIAA0319LQ8IZA0 1049 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 GPR156Q8NFN8 814 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 KLHDC4Q8TBB5 520 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 LRTOMTQ8WZ04 291 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 RGMAQ96B86 450 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 ARMT1Q9H993 441 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 SAE1Q9UBE0 346 aaPredicted RBP6.49□□□□□ -1.37
CPSF6-206ENST00000550987 ZFP69BQ9UJL9 534 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 NR2E3Q9Y5X4 410 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 QSER1Q2KHR3 1735 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 SPATA31A5Q5VU36 1347 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 SPATA31A7Q8IWB4 1347 aa6.49□□□□□ -1.37
CPSF6-206ENST00000550987 LAMA2P24043 3122 aaKnown RBP6.48□□□□□ -1.37
CPSF6-206ENST00000550987 KIAA1324LA8MWY0 1029 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-206ENST00000550987 H3BUI4 141 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 NPHP1O15259 732 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 CYP2C8P10632 490 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 SLC5A1P13866 664 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-206ENST00000550987 IL12RB1P42701 662 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 PER3P56645 1201 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 GPSM2P81274 684 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 CACNB2Q08289 660 aaPredicted RBP6.48□□□□□ -1.37
CPSF6-206ENST00000550987 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
CPSF6-206ENST00000550987 ANO1Q5XXA6 986 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 STPG3Q8N7X2 389 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 DTX3Q8N9I9 347 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 PTPRHQ9HD43 1115 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 TDP1Q9NUW8 608 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 POLHQ9Y253 713 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 RPTORQ8N122 1335 aa6.48□□□□□ -1.37
CPSF6-206ENST00000550987 CFAP65Q6ZU64 1925 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 F5H423 210 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 SLC16A6O15403 523 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 DAPK3O43293 454 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PRAMEF4O60810 478 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 TCEA3O75764 348 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PPM1FP49593 454 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 ALDH5A1P51649 535 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 MAP2K6P52564 334 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 AGFG1P52594 562 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 YBX1P67809 324 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 IL13RA1P78552 427 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 FAM83BQ5T0W9 1011 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 FYB2Q5VWT5 728 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 RSPH3Q86UC2 560 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 STK32CQ86UX6 486 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 MYLK4Q86YV6 388 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-206ENST00000550987 C3orf20Q8ND61 904 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 OR5AN1Q8NGI8 311 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 CPA5Q8WXQ8 436 aa6.47□□□□□ -1.37
CPSF6-206ENST00000550987 PGBD4Q96DM1 585 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms