RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 FBXO18Q8NFZ0 1043 aa22.77■■□□□ 1.24
CACNB3-218ENST00000550771 KIFAP3Q92845 792 aa22.77■■□□□ 1.24
CACNB3-218ENST00000550771 IFT74Q96LB3 600 aa22.77■■□□□ 1.24
CACNB3-218ENST00000550771 PTPRZ1P23471 2315 aaPredicted RBP22.77■■□□□ 1.24
CACNB3-218ENST00000550771 TMEM189-UBE2V1I3L0A0 370 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 EDN1P05305 212 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 LIG1P18858 919 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 FXR2P51116 673 aaKnown RBP eCLIP22.76■■□□□ 1.23
CACNB3-218ENST00000550771 EEF1DP3Q658K8 133 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.76■■□□□ 1.23
CACNB3-218ENST00000550771 APBB1IPQ7Z5R6 666 aaPredicted RBP22.76■■□□□ 1.23
CACNB3-218ENST00000550771 CCDC83Q8IWF9 413 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 CXCL16Q9H2A7 254 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 SLC2A4RGQ9NR83 387 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 USP20Q9Y2K6 914 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 DOCK8Q8NF50 2099 aa22.76■■□□□ 1.23
CACNB3-218ENST00000550771 STK25O00506 426 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 C8AP07357 584 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 POU2F2P09086 479 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 CCT6AP40227 531 aaKnown RBP22.75■■□□□ 1.23
CACNB3-218ENST00000550771 HMGN5P82970 282 aaKnown RBP22.75■■□□□ 1.23
CACNB3-218ENST00000550771 ECM1Q16610 540 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 PPM1LQ5SGD2 360 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 ERICH6BQ5W0A0 696 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 PHLDB3Q6NSJ2 640 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 GRASPQ7Z6J2 395 aaPredicted RBP22.75■■□□□ 1.23
CACNB3-218ENST00000550771 GPR152Q8TDT2 470 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 KIFC3Q9BVG8 833 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 BHMT2Q9H2M3 363 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 TBC1D17Q9HA65 648 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 CDH7Q9ULB5 785 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 CA14Q9ULX7 337 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 GDAQ9Y2T3 454 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 STK24Q9Y6E0 443 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 NUMBLQ9Y6R0 609 aa22.75■■□□□ 1.23
CACNB3-218ENST00000550771 FGFR3P22607 806 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 RFX1P22670 979 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 RAB33AQ14088 237 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 UVSSAQ2YD98 709 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 NT5DC1Q5TFE4 455 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 ATF7IP2Q5U623 682 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 DCLRE1AQ6PJP8 1040 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 RTL10Q7L3V2 364 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 C4orf32Q8N8J7 132 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 PPP1R10Q96QC0 940 aaKnown RBP22.74■■□□□ 1.23
CACNB3-218ENST00000550771 ARHGEF3Q9NR81 526 aa22.74■■□□□ 1.23
CACNB3-218ENST00000550771 ADAM12O43184 909 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 XYLBO75191 536 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 B3GAT3O94766 335 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 PDIA5Q14554 519 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 UROC1Q96N76 676 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 MTRRQ9UBK8 725 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 LRWD1Q9UFC0 647 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 NOL7Q9UMY1 257 aaKnown RBP22.73■■□□□ 1.23
CACNB3-218ENST00000550771 KIAA1024Q9UPX6 916 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 TNFSF13BQ9Y275 285 aa22.73■■□□□ 1.23
CACNB3-218ENST00000550771 K7ERI5 159 aa22.72■■□□□ 1.23
CACNB3-218ENST00000550771 SEC24BO95487 1268 aa22.72■■□□□ 1.23
CACNB3-218ENST00000550771 GNL2Q13823 731 aaKnown RBP22.72■■□□□ 1.23
CACNB3-218ENST00000550771 CCL16O15467 120 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 TRAPPC3O43617 180 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 OR1D2P34982 312 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 UPP1Q16831 310 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 GLRA4Q5JXX5 417 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 AXDND1Q5T1B0 1012 aaPredicted RBP22.71■■□□□ 1.23
CACNB3-218ENST00000550771 MTSS1LQ765P7 747 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 IGSF22Q8N9C0 903 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 FAM184AQ8NB25 1140 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 SLC7A14Q8TBB6 771 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 FGF13Q92913 245 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 FGF14Q92915 247 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 SNX27Q96L92 541 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 ZSCAN31Q96LW9 406 aaPredicted RBP22.71■■□□□ 1.23
CACNB3-218ENST00000550771 RAB34Q9BZG1 259 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 POLD4Q9HCU8 107 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 SIT1Q9Y3P8 196 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 BACE2Q9Y5Z0 518 aa22.71■■□□□ 1.23
CACNB3-218ENST00000550771 FAM186AA6NE01 2351 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 RIF1Q5UIP0 2472 aaKnown RBP22.7■■□□□ 1.22
CACNB3-218ENST00000550771 CFAP54Q96N23 3096 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 CLCNKBP51801 687 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 NTHL1P78549 312 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 XKR4Q5GH76 650 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 PARM1Q6UWI2 310 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 CD300LGQ6UXG3 332 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 ANKS3Q6ZW76 656 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 RPP25Q9BUL9 199 aaKnown RBP22.7■■□□□ 1.22
CACNB3-218ENST00000550771 SEMA4AQ9H3S1 761 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 TMEM134Q9H6X4 195 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 SH2B1Q9NRF2 756 aaPredicted RBP22.7■■□□□ 1.22
CACNB3-218ENST00000550771 TOPORSQ9NS56 1045 aaPredicted RBP22.7■■□□□ 1.22
CACNB3-218ENST00000550771 DDX19AQ9NUU7 478 aaKnown RBP22.7■■□□□ 1.22
CACNB3-218ENST00000550771 KCNH3Q9ULD8 1083 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 POLIQ9UNA4 740 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 PHLPP2Q6ZVD8 1323 aa22.7■■□□□ 1.22
CACNB3-218ENST00000550771 SMIM28A0A1B0GU29 152 aa22.69■■□□□ 1.22
CACNB3-218ENST00000550771 IGFBP6P24592 240 aaPredicted RBP22.69■■□□□ 1.22
CACNB3-218ENST00000550771 U2AF2P26368 475 aaKnown RBP eCLIP22.69■■□□□ 1.22
CACNB3-218ENST00000550771 GRM5P41594 1212 aa22.69■■□□□ 1.22
CACNB3-218ENST00000550771 NPTX2P47972 431 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms