RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 TSPYL1Q9H0U9 437 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 DIAPH3Q9NSV4 1193 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCNT1-203ENST00000550457 OXSMQ9NWU1 459 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 H2AFY2Q9P0M6 372 aaPredicted RBP3.92□□□□□ -1.78
CCNT1-203ENST00000550457 ANKFY1Q9P2R3 1169 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 EIF2B4Q9UI10 523 aaKnown RBP3.92□□□□□ -1.78
CCNT1-203ENST00000550457 SPO11Q9Y5K1 396 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 C9orf84Q5VXU9 1444 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 SYNMO15061 1565 aa3.92□□□□□ -1.78
CCNT1-203ENST00000550457 TMEM200CA6NKL6 621 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 LEFTY2O00292 366 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 ELL2O00472 640 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 PPFIA4O75335 1185 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 RECQL4O94761 1208 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 BAG4O95429 457 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 GYPEP15421 78 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 NUCB1Q02818 461 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 GABPB1Q06547 395 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 CD69Q07108 199 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 CHAF1AQ13111 956 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 MRPL49Q13405 166 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 MAN2A1Q16706 1144 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 ZSCAN23Q3MJ62 389 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 FNDC3BQ53EP0 1204 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 TAF7LQ5H9L4 462 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 METTL24Q5JXM2 366 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 CDCA2Q69YH5 1023 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 TIGD7Q6NT04 549 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 FTSJ3Q8IY81 847 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 UNC5BQ8IZJ1 945 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 IPO4Q8TEX9 1081 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 GCC1Q96CN9 775 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 FAM193BQ96PV7 902 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 FDXACB1Q9BRP7 624 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 TEX101Q9BY14 249 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 WDR11Q9BZH6 1224 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 SERHL2Q9H4I8 314 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 TOMM22Q9NS69 142 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 SPTLC3Q9NUV7 552 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 KIF3AQ9Y496 699 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 CHST2Q9Y4C5 530 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 ADGRL1O94910 1474 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 NUP153P49790 1475 aaKnown RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 IL16Q14005 1332 aa3.91□□□□□ -1.78
CCNT1-203ENST00000550457 ZNF644Q9H582 1327 aaPredicted RBP3.91□□□□□ -1.78
CCNT1-203ENST00000550457 CROCC2H7BZ55 1655 aa3.9□□□□□ -1.78
CCNT1-203ENST00000550457 CDK13Q14004 1512 aaKnown RBP3.9□□□□□ -1.78
CCNT1-203ENST00000550457 ARHGEF5Q12774 1597 aa3.9□□□□□ -1.78
CCNT1-203ENST00000550457 LAMC3Q9Y6N6 1575 aa3.9□□□□□ -1.78
CCNT1-203ENST00000550457 A0A0U1RQG5 324 aaPredicted RBP3.9□□□□□ -1.79
CCNT1-203ENST00000550457 NRP1O14786 923 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 NCR1O76036 304 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 PCDH8O95206 1070 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 LY86O95711 162 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 JMJD7P0C870 316 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 ATP2A2P16615 1042 aaKnown RBP3.9□□□□□ -1.79
CCNT1-203ENST00000550457 ZNF37AP17032 561 aaPredicted RBP3.9□□□□□ -1.79
CCNT1-203ENST00000550457 MCM2P49736 904 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 SQSTM1Q13501 440 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 FAM83AQ86UY5 434 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 XYLT1Q86Y38 959 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 SYT12Q8IV01 421 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 MSL3Q8N5Y2 521 aaKnown RBP3.9□□□□□ -1.79
CCNT1-203ENST00000550457 OR5M3Q8NGP4 307 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 PIBF1Q8WXW3 757 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 HIST1H2AHQ96KK5 128 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 HIST1H2AJQ99878 128 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 EPC1Q9H2F5 836 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 R3HDMLQ9H3Y0 253 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 CYP4F11Q9HBI6 524 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 AKIP1Q9NQ31 210 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 LMBRD1Q9NUN5 540 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 SYBUQ9NX95 663 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 OGFRQ9NZT2 677 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 DKK2Q9UBU2 259 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 ADCY10Q96PN6 1610 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 MAGI2Q86UL8 1455 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 SCAF11Q99590 1463 aaKnown RBP3.9□□□□□ -1.79
CCNT1-203ENST00000550457 MYPNQ86TC9 1320 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 FAM135AQ9P2D6 1515 aa3.9□□□□□ -1.79
CCNT1-203ENST00000550457 ABCC11Q96J66 1382 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 PTMAP06454 111 aaKnown RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 TYRP1P17643 537 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 TAP1Q03518 808 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 ZBTB41Q5SVQ8 909 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 CCDC62Q6P9F0 684 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 CASC1Q6TDU7 716 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 BTNL9Q6UXG8 535 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 DOK3Q7L591 496 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 GPRIN1Q7Z2K8 1008 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 CHD1LQ86WJ1 897 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 ARHGEF19Q8IW93 802 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 GLB1L3Q8NCI6 653 aaPredicted RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 IL17RAQ96F46 866 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 CFAP53Q96M91 514 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 C8orf37Q96NL8 207 aa3.89□□□□□ -1.79
CCNT1-203ENST00000550457 PUS7Q96PZ0 661 aaKnown RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 DNAJC2Q99543 621 aaKnown RBP3.89□□□□□ -1.79
CCNT1-203ENST00000550457 KANSL2Q9H9L4 492 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms