RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
VDR-208ENST00000550325 ESRRAP11474 423 aaPredicted RBP12.9□□□□□ -0.34
VDR-208ENST00000550325 PSMC2P35998 433 aaKnown RBP12.9□□□□□ -0.34
VDR-208ENST00000550325 FMO5P49326 533 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CDK8P49336 464 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 PICALMQ13492 652 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 SBK1Q52WX2 424 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 DAB2IPQ5VWQ8 1189 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 INPP5DQ92835 1189 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 AAASQ9NRG9 546 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 PCDHA2Q9Y5H9 948 aa12.9□□□□□ -0.34
VDR-208ENST00000550325 COL1A1P02452 1464 aaPredicted RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 TBX10O75333 385 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 NEK3P51956 506 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
VDR-208ENST00000550325 TTBK2Q6IQ55 1244 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 OPTNQ96CV9 577 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 HEY2Q9UBP5 337 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 BAG3O95817 575 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 CCNFP41002 786 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 SLC34A1Q06495 639 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 PPP2R5CQ13362 524 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 GIT2Q14161 759 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 LVRNQ6Q4G3 990 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 FAM210AQ96ND0 272 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 CADM1Q9BY67 442 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 NCANO14594 1321 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 GOLGA8SH3BPF8 625 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 CTNNA2P26232 953 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 C2CD6Q53TS8 623 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 IZUMO2Q6UXV1 221 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 KLHL23Q8NBE8 558 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 ZNF287Q9HBT7 754 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
VDR-208ENST00000550325 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 USTQ9Y2C2 406 aa12.89□□□□□ -0.35
VDR-208ENST00000550325 GSTA2P09210 222 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 IZUMO3Q5VZ72 239 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ZFAND2BQ8WV99 257 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 SLC5A5Q92911 643 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 FBXO6Q9NRD1 293 aaPredicted RBP12.88□□□□□ -0.35
VDR-208ENST00000550325 ARL8BQ9NVJ2 186 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ARMCX1Q9P291 453 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 CCDC88AQ3V6T2 1871 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PDXKO00764 312 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 CCDC22O60826 627 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PSMG1O95456 288 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
VDR-208ENST00000550325 KAZNQ674X7 775 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
VDR-208ENST00000550325 WDR60Q8WVS4 1066 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 GPR101Q96P66 508 aaPredicted RBP12.88□□□□□ -0.35
VDR-208ENST00000550325 RBM15Q96T37 977 aaKnown RBP eCLIP12.88□□□□□ -0.35
VDR-208ENST00000550325 MIPEPQ99797 713 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ABLIM1O14639 778 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 BCRP11274 1271 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ITIH2P19823 946 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ZNF76P36508 570 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PPM1KQ8N3J5 372 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 GALNT8Q9NY28 637 aa12.88□□□□□ -0.35
VDR-208ENST00000550325 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
VDR-208ENST00000550325 HOXD13P35453 343 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 PGM1P36871 562 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 SNAP25P60880 206 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 ACVR2BQ13705 512 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 SLC1A5Q15758 541 aa12.87□□□□□ -0.35
VDR-208ENST00000550325 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms