RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 PRKCBP05771 671 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 THP07101 528 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 PRPF4BQ13523 1007 aaKnown RBP17.02■□□□□ 0.32
RAB5C-205ENST00000550013 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 DCLRE1AQ6PJP8 1040 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 PARM1Q6UWI2 310 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 FGF14Q92915 247 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 FOXQ1Q9C009 403 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 CCDC113Q9H0I3 377 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 SLC2A4RGQ9NR83 387 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 DLGAP2Q9P1A6 1054 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 FANCMQ8IYD8 2048 aa17.02■□□□□ 0.32
RAB5C-205ENST00000550013 C8AP07357 584 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 HNRNPA1P09651 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB5C-205ENST00000550013 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-205ENST00000550013 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 MAPK6Q16659 721 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 PPM1LQ5SGD2 360 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 LIN9Q5TKA1 542 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 KCNG4Q8TDN1 519 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 NACC1Q96RE7 527 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
RAB5C-205ENST00000550013 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 POLD4Q9HCU8 107 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 CDH7Q9ULB5 785 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 SIT1Q9Y3P8 196 aa17.01■□□□□ 0.31
RAB5C-205ENST00000550013 CACNA1AO00555 2505 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 ARHGEF35A5YM69 484 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 ACKR2O00590 384 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 LRRN2O75325 713 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 GLULP15104 373 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 CYP11B2P19099 503 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 GPC5P78333 572 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 FOXK2Q01167 660 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 ITFG1Q8TB96 612 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 SLC7A14Q8TBB6 771 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 POLIQ9UNA4 740 aa17■□□□□ 0.31
RAB5C-205ENST00000550013 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
RAB5C-205ENST00000550013 OTOGLQ3ZCN5 2332 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 LMNAP02545 664 aaKnown RBP16.99■□□□□ 0.31
RAB5C-205ENST00000550013 RPA1P27694 616 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 NAMPTP43490 491 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 ID4P47928 161 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 NEK4P51957 841 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
RAB5C-205ENST00000550013 ZNF174Q15697 407 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 GLRA4Q5JXX5 417 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 AXDND1Q5T1B0 1012 aaPredicted RBP16.99■□□□□ 0.31
RAB5C-205ENST00000550013 RSPO2Q6UXX9 243 aaPredicted RBP16.99■□□□□ 0.31
RAB5C-205ENST00000550013 PJA1Q8NG27 643 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 FGF13Q92913 245 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 ADPGKQ9BRR6 497 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
RAB5C-205ENST00000550013 XYLBO75191 536 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 OR52Z1P0C646 297 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 SP9P0CG40 484 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 FGFR3P22607 806 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 HOXA9P31269 272 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 OR1D2P34982 312 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 STARD6P59095 220 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 CD300LGQ6UXG3 332 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
RAB5C-205ENST00000550013 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
RAB5C-205ENST00000550013 I3L4J1 428 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 CLCNKBP51801 687 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 SNW1Q13573 536 aaKnown RBP16.97■□□□□ 0.31
RAB5C-205ENST00000550013 RAB33AQ14088 237 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 ECM1Q16610 540 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 MTSS1LQ765P7 747 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 C1orf210Q8IVY1 113 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 PPP1R10Q96QC0 940 aaKnown RBP16.97■□□□□ 0.31
RAB5C-205ENST00000550013 KXD1Q9BQD3 176 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 SEMA4AQ9H3S1 761 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 GOLGA2P5Q9HBQ8 144 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 MTRRQ9UBK8 725 aa16.97■□□□□ 0.31
RAB5C-205ENST00000550013 PATJQ8NI35 1801 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 B3GAT3O94766 335 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 TKTP29401 623 aaKnown RBP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 RBM25P49756 843 aaKnown RBP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 PPP2R5AQ15172 486 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 SAFBQ15424 915 aaKnown RBP eCLIP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 NPAS3Q8IXF0 933 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 MAML2Q8IZL2 1156 aaPredicted RBP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 SHDQ96IW2 340 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 IFT74Q96LB3 600 aa16.96■□□□□ 0.31
RAB5C-205ENST00000550013 DNMT3BQ9UBC3 853 aaKnown RBP16.96■□□□□ 0.31
RAB5C-205ENST00000550013 MTF2Q9Y483 593 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms